Tim Peters
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/DMRcate |
| Branch: RELEASE_3_10 |
| Last Commit: 705da73 |
| Last Changed Date: 2020-01-09 18:51:43 -0400 (Thu, 09 Jan 2020) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:22:37 -0400 (Wed, 15 Apr 2020).
| Package 470/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DMRcate 2.0.7 Tim Peters
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | ERROR | OK | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: DMRcate |
| Version: 2.0.7 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/DMRcate_2.0.7.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.0.7.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.0.7.zip && rm DMRcate_2.0.7.tar.gz DMRcate_2.0.7.zip |
| StartedAt: 2020-04-14 20:37:57 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 20:39:11 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 74.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/DMRcate_2.0.7.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.0.7.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.0.7.zip && rm DMRcate_2.0.7.tar.gz DMRcate_2.0.7.zip
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install for i386
* installing *source* package 'DMRcate' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** help
*** installing help indices
converting help for package 'DMRcate'
finding HTML links ... done
CpGannotated-class html
DMR.plot html
DMRcate-internal html
DMRcate-package html
DMResults-class html
changeFDR html
cpg.annotate html
dmrcate html
extractRanges html
rmSNPandCH html
sequencing.annotate html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DMRcate' ...
** testing if installed package can be loaded
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
* MD5 sums
packaged installation of 'DMRcate' as DMRcate_2.0.7.zip
* DONE (DMRcate)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'DMRcate' successfully unpacked and MD5 sums checked