Back to the "Multiple platform build/check report" A  B  C  D  E  F [G] H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.1: BUILD BIN report for GGtools on moscato2

This page was generated on 2015-10-09 09:27:45 -0700 (Fri, 09 Oct 2015).

Package 412/1024HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GGtools 5.4.0
VJ Carey
Snapshot Date: 2015-10-08 17:20:21 -0700 (Thu, 08 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_1/madman/Rpacks/GGtools
Last Changed Rev: 102591 / Revision: 109384
Last Changed Date: 2015-04-16 12:42:01 -0700 (Thu, 16 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: GGtools
Version: 5.4.0
Command: cd GGtools.buildbin-libdir/GGtools && zip -r ../../GGtools_5.4.0.zip . & cd ../..
StartedAt: 2015-10-09 07:59:43 -0700 (Fri, 09 Oct 2015)
EndedAt: 2015-10-09 08:00:08 -0700 (Fri, 09 Oct 2015)
EllapsedTime: 25.1 seconds
RetCode: 0
Status:  OK  
PackageFile: GGtools_5.4.0.zip
PackageFileSize: 139.8 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd GGtools.buildbin-libdir/GGtools && zip -r ../../GGtools_5.4.0.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (188 bytes security) (deflated 53%)
  adding: cloud/ (256 bytes security) (stored 0%)
  adding: cloud/ciseqByCluster.R (188 bytes security) (deflated 60%)
  adding: cloud/newtest.R (188 bytes security) (deflated 41%)
  adding: data/ (256 bytes security) (stored 0%)
  adding: data/b1.rda (188 bytes security) (stored 0%)
  adding: data/b2.rda (188 bytes security) (stored 0%)
  adding: data/datalist (188 bytes security) (stored 0%)
  adding: data/eset.rda (188 bytes security) (deflated 0%)
  adding: data/hg19.si.df.rda (188 bytes security) (stored 0%)
  adding: data/hmm878.rda (188 bytes security) (deflated 0%)
  adding: data/lgeu.rda (188 bytes security) (deflated 5%)
  adding: data/strMultPop.rda (188 bytes security) (deflated 0%)
  adding: DESCRIPTION (188 bytes security) (deflated 46%)
  adding: doc/ (256 bytes security) (stored 0%)
  adding: doc/GGtools.pdf (188 bytes security) (deflated 57%)
  adding: doc/GGtools.R (188 bytes security) (deflated 76%)
  adding: doc/GGtools.Rnw (188 bytes security) (deflated 59%)
  adding: doc/index.html (188 bytes security) (deflated 58%)
  adding: extpacksupp/ (256 bytes security) (stored 0%)
  adding: extpacksupp/DESCRIPTION.proto (188 bytes security) (deflated 27%)
  adding: extpacksupp/zzz.R (188 bytes security) (deflated 45%)
  adding: hapmap/ (256 bytes security) (stored 0%)
  adding: hapmap/relationships_w_pops_051208.txt (188 bytes security) (deflated 80%)
  adding: hapmap/smallc20CEU.txt.gz (188 bytes security) (stored 0%)
  adding: hapmap/src.rel.txt (188 bytes security) (deflated 5%)
  adding: help/ (256 bytes security) (stored 0%)
  adding: help/aliases.rds (188 bytes security) (stored 0%)
  adding: help/AnIndex (188 bytes security) (deflated 80%)
  adding: help/GGtools.rdb (188 bytes security) (deflated 1%)
  adding: help/GGtools.rdx (188 bytes security) (stored 0%)
  adding: help/paths.rds (188 bytes security) (stored 0%)
  adding: html/ (256 bytes security) (stored 0%)
  adding: html/00Index.html (188 bytes security) (deflated 88%)
  adding: html/R.css (188 bytes security) (deflated 75%)
  adding: INDEX (188 bytes security) (deflated 65%)
  adding: MD5 (188 bytes security) (deflated 47%)
  adding: Meta/ (256 bytes security) (stored 0%)
  adding: Meta/data.rds (188 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (188 bytes security) (stored 0%)
  adding: Meta/links.rds (188 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (188 bytes security) (stored 0%)
  adding: Meta/package.rds (188 bytes security) (stored 0%)
  adding: Meta/Rd.rds (188 bytes security) (stored 0%)
  adding: Meta/vignette.rds (188 bytes security) (stored 0%)
  adding: NAMESPACE (188 bytes security) (deflated 64%)
  adding: NEWS (188 bytes security) (deflated 57%)
  adding: oldman/ (256 bytes security) (stored 0%)
  adding: oldman/best.cis.eQTLs.Rd (188 bytes security) (deflated 55%)
  adding: oldman/calfig.Rd (188 bytes security) (deflated 51%)
  adding: oldman/cisProxScores-class.Rd (188 bytes security) (deflated 55%)
  adding: oldman/cisProxScores.Rd (188 bytes security) (deflated 61%)
  adding: oldman/clipPCs.Rd (188 bytes security) (deflated 52%)
  adding: oldman/degnerASE01.Rd (188 bytes security) (deflated 62%)
  adding: oldman/dropMonomorphies.Rd (188 bytes security) (deflated 48%)
  adding: oldman/eqtlEstimatesManager-class.Rd (188 bytes security) (deflated 55%)
  adding: oldman/eqtlFDRtab-class.Rd (188 bytes security) (deflated 57%)
  adding: oldman/eqtlTests.Rd (188 bytes security) (deflated 58%)
  adding: oldman/eqtlTestsManager-class.Rd (188 bytes security) (deflated 66%)
  adding: oldman/ex6.Rd (188 bytes security) (deflated 63%)
  adding: oldman/exome_minp.Rd (188 bytes security) (deflated 49%)
  adding: oldman/externalize.Rd (188 bytes security) (deflated 52%)
  adding: oldman/geneIndcol.Rd (188 bytes security) (deflated 51%)
  adding: oldman/geneRanges.Rd (188 bytes security) (deflated 52%)
  adding: oldman/genewiseFDRtab.Rd (188 bytes security) (deflated 53%)
  adding: oldman/GGtools-package.Rd (188 bytes security) (deflated 47%)
  adding: oldman/gwSnpTests.Rd (188 bytes security) (deflated 55%)
  adding: oldman/hla2set.Rd (188 bytes security) (deflated 46%)
  adding: oldman/hmceuB36.2021.Rd (188 bytes security) (deflated 53%)
  adding: oldman/imphm2_1KG_20.Rd (188 bytes security) (deflated 54%)
  adding: oldman/m20.Rd (188 bytes security) (deflated 44%)
  adding: oldman/makeCommonSNPs.Rd (188 bytes security) (deflated 53%)
  adding: oldman/manhPlot.Rd (188 bytes security) (deflated 49%)
  adding: oldman/mkCisTransDirector.Rd (188 bytes security) (deflated 51%)
  adding: oldman/mrefhap2sm.Rd (188 bytes security) (deflated 48%)
  adding: oldman/multiCisDirector-class.Rd (188 bytes security) (deflated 50%)
  adding: oldman/pcChooser.Rd (188 bytes security) (deflated 50%)
  adding: oldman/permEx.Rd (188 bytes security) (deflated 47%)
  adding: oldman/plot-methods.Rd (188 bytes security) (deflated 62%)
  adding: oldman/probeLocations.Rd (188 bytes security) (deflated 56%)
  adding: oldman/relocate.Rd (188 bytes security) (deflated 51%)
  adding: oldman/sm2ped.Rd (188 bytes security) (deflated 50%)
  adding: oldman/topSnps-methods.Rd (188 bytes security) (deflated 59%)
  adding: oldman/transManager-class.Rd (188 bytes security) (deflated 50%)
  adding: oldman/transScores.Rd (188 bytes security) (deflated 61%)
  adding: oldman/transTab.Rd (188 bytes security) (deflated 47%)
  adding: oldman/vcf2sm-methods.Rd (188 bytes security) (deflated 40%)
  adding: oldman/vcf2sm.Rd (188 bytes security) (deflated 45%)
  adding: oldman/X2chunk.Rd (188 bytes security) (deflated 53%)
  adding: oldRsrc/ (256 bytes security) (stored 0%)
  adding: oldRsrc/allS4.R (188 bytes security) (deflated 73%)
  adding: oldRsrc/bestCis.R (188 bytes security) (deflated 65%)
  adding: oldRsrc/bindScores.R (188 bytes security) (deflated 51%)
  adding: oldRsrc/cisFDR.R (188 bytes security) (deflated 78%)
  adding: oldRsrc/cisgetter.R (188 bytes security) (deflated 70%)
  adding: oldRsrc/cisSnpTests.R (188 bytes security) (deflated 61%)
  adding: oldRsrc/clipPCs.R (188 bytes security) (deflated 46%)
  adding: oldRsrc/comb.R (188 bytes security) (deflated 68%)
  adding: oldRsrc/egtset.R (188 bytes security) (deflated 57%)
  adding: oldRsrc/eqtlEstimates.R (188 bytes security) (deflated 66%)
  adding: oldRsrc/exome_minp.R (188 bytes security) (deflated 68%)
  adding: oldRsrc/externalize.R (188 bytes security) (deflated 67%)
  adding: oldRsrc/feqtltests.R (188 bytes security) (deflated 62%)
  adding: oldRsrc/filterCode.R (188 bytes security) (deflated 28%)
  adding: oldRsrc/fullsynth.R (188 bytes security) (deflated 72%)
  adding: oldRsrc/geneRanges.R (188 bytes security) (deflated 61%)
  adding: oldRsrc/geneTrack.R (188 bytes security) (deflated 48%)
  adding: oldRsrc/getTransScores.R (188 bytes security) (deflated 51%)
  adding: oldRsrc/gwSnpScreen.R (188 bytes security) (deflated 50%)
  adding: oldRsrc/interleave2cis.R (188 bytes security) (deflated 47%)
  adding: oldRsrc/machutils.R (188 bytes security) (deflated 57%)
  adding: oldRsrc/minp.R (188 bytes security) (deflated 58%)
  adding: oldRsrc/multff.R (188 bytes security) (deflated 74%)
  adding: oldRsrc/newEQTL.R (188 bytes security) (deflated 70%)
  adding: oldRsrc/pcc.R (188 bytes security) (deflated 47%)
  adding: oldRsrc/permEx.R (188 bytes security) (deflated 40%)
  adding: oldRsrc/probeloc.R (188 bytes security) (deflated 64%)
  adding: oldRsrc/regressOut.R (188 bytes security) (deflated 28%)
  adding: oldRsrc/scoresInRanges.R (188 bytes security) (deflated 62%)
  adding: oldRsrc/shiftRight.R (188 bytes security) (deflated 30%)
  adding: oldRsrc/snp130locs.R (188 bytes security) (deflated 25%)
  adding: oldRsrc/sumDirectors.R (188 bytes security) (deflated 57%)
  adding: oldRsrc/X2chunk.R (188 bytes security) (deflated 61%)
  adding: oldRsrc/zzz.R (188 bytes security) (deflated 13%)
  adding: parts/ (256 bytes security) (stored 0%)
  adding: parts/20.rda (188 bytes security) (deflated 0%)
  adding: parts/21.rda (188 bytes security) (deflated 0%)
  adding: provenance/ (256 bytes security) (stored 0%)
  adding: provenance/human/ (256 bytes security) (stored 0%)
  adding: provenance/human/doallgzOct17b.R (188 bytes security) (deflated 39%)
  adding: provenance/human/getall.sh (188 bytes security) (deflated 93%)
  adding: provenance/human/notes.txt (188 bytes security) (deflated 68%)
  adding: provenance/mouse/ (256 bytes security) (stored 0%)
  adding: provenance/mouse/notes.txt (188 bytes security) (deflated 38%)
  adding: pup/ (256 bytes security) (stored 0%)
  adding: pup/combn238_chr6.pup (188 bytes security) (deflated 69%)
  adding: R/ (256 bytes security) (stored 0%)
  adding: R/GGtools (188 bytes security) (deflated 41%)
  adding: R/GGtools.rdb (188 bytes security) (deflated 20%)
  adding: R/GGtools.rdx (188 bytes security) (deflated 3%)
  adding: rdas/ (256 bytes security) (stored 0%)
  adding: rdas/ceu_21.rda (188 bytes security) (deflated 1%)
  adding: rdas/ceu_22.rda (188 bytes security) (deflated 1%)
  adding: scripts/ (256 bytes security) (stored 0%)
  adding: scripts/lkme.pdf (188 bytes security) (deflated 10%)
  adding: scripts/lkme.Rnw (188 bytes security) (deflated 52%)
  adding: vcf/ (256 bytes security) (stored 0%)
  adding: vcf/c20exch.vcf.gz (188 bytes security) (deflated 0%)
  adding: vcf/c20exch.vcf.gz.tbi (188 bytes security) (deflated 1%)
  adding: vcf/CEU.exon.2010_09.genotypes.vcf.gz (188 bytes security) (deflated 0%)
  adding: vcf/CEU.exon.2010_09.genotypes.vcf.gz.tbi (188 bytes security) (deflated 9%)
  adding: vcf/provenance.txt (188 bytes security) (deflated 18%)
  adding: vcf/valid-4.0.vcf.gz (188 bytes security) (stored 0%)