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BioC 3.1: BUILD report for ChIPXpress on petty

This page was generated on 2015-10-09 09:35:13 -0700 (Fri, 09 Oct 2015).

Package 163/1024HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPXpress 1.10.0
George Wu
Snapshot Date: 2015-10-08 17:20:21 -0700 (Thu, 08 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_1/madman/Rpacks/ChIPXpress
Last Changed Rev: 102591 / Revision: 109384
Last Changed Date: 2015-04-16 12:42:01 -0700 (Thu, 16 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 ...NOT SUPPORTED...NOT SUPPORTED...NOT SUPPORTED...
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded [ ERROR ] skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ChIPXpress
Version: 1.10.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ChIPXpress
StartedAt: 2015-10-08 19:45:20 -0700 (Thu, 08 Oct 2015)
EndedAt: 2015-10-08 19:45:55 -0700 (Thu, 08 Oct 2015)
EllapsedTime: 35.6 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ChIPXpress
###
##############################################################################
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* checking for file ‘ChIPXpress/DESCRIPTION’ ... OK
* preparing ‘ChIPXpress’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: ChIPXpressData
Loading required package: bigmemory
Loading required package: bigmemory.sri
Loading required package: BH

bigmemory >= 4.0 is a major revision since 3.1.2; please see packages
biganalytics and and bigtabulate and http://www.bigmemory.org for more information.

Setting options('download.file.method.GEOquery'='auto')
Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’

Error: processing vignette 'ChIPXpress.Rnw' failed with diagnostics:
 chunk 2 
Error in (function (classes, fdef, mtable)  : 
  unable to find an inherited method for function ‘attach.resource’ for signature ‘"NULL"’
Execution halted