Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N [O] P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.0: INSTALL report for openCyto on zin1

This page was generated on 2015-04-10 09:41:25 -0700 (Fri, 10 Apr 2015).

Package 626/933HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
openCyto 1.4.0
Mike Jiang
Snapshot Date: 2015-04-09 16:20:12 -0700 (Thu, 09 Apr 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_0/madman/Rpacks/openCyto
Last Changed Rev: 95439 / Revision: 102249
Last Changed Date: 2014-10-13 14:38:33 -0700 (Mon, 13 Oct 2014)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64 [ OK ] OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK 

Summary

Package: openCyto
Version: 1.4.0
Command: /home/biocbuild/bbs-3.0-bioc/R/bin/R CMD INSTALL openCyto
StartedAt: 2015-04-09 17:22:41 -0700 (Thu, 09 Apr 2015)
EndedAt: 2015-04-09 17:23:04 -0700 (Thu, 09 Apr 2015)
EllapsedTime: 22.5 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.0-bioc/R/bin/R CMD INSTALL openCyto
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.0-bioc/R/library’
* installing *source* package ‘openCyto’ ...
** libs
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/Rcpp/include"   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/Rcpp/include"   -fpic  -g -O2  -Wall -c misc.cpp -o misc.o
misc.cpp: In function ‘Rcpp::NumericMatrix collapseData(Rcpp::List, Rcpp::StringVector)’:
misc.cpp:10:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
misc.cpp:21:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
gcc -std=gnu99 -I/home/biocbuild/bbs-3.0-bioc/R/include -DNDEBUG  -I/usr/local/include -I"/home/biocbuild/bbs-3.0-bioc/R/library/Rcpp/include"   -fpic  -g -O2  -Wall -c unlockNamespace.c -o unlockNamespace.o
g++ -shared -L/home/biocbuild/bbs-3.0-bioc/R/lib -L/usr/local/lib -o openCyto.so RcppExports.o misc.o unlockNamespace.o -L/home/biocbuild/bbs-3.0-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.0-bioc/R/library/openCyto/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘HowToWriteCSVTemplate.Rmd’ 
   ‘openCytoVignette.Rmd’ 
** testing if installed package can be loaded
* DONE (openCyto)