metagenomeSeq 1.8.3
Joseph N. Paulson
| Snapshot Date: 2015-04-09 16:20:12 -0700 (Thu, 09 Apr 2015) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_0/madman/Rpacks/metagenomeSeq | | Last Changed Rev: 97784 / Revision: 102249 | | Last Changed Date: 2014-12-18 15:16:55 -0800 (Thu, 18 Dec 2014) |
| zin1 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | OK | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK | [ OK ] |
| perceval | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK | OK |
| oaxaca | Mac OS X Mavericks (10.9.5) / x86_64 | OK | OK | OK | OK |
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### Running command:
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### cd metagenomeSeq.buildbin-libdir/metagenomeSeq && zip -r ../../metagenomeSeq_1.8.3.zip . & cd ../..
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adding: CITATION (188 bytes security) (deflated 69%)
adding: data/ (256 bytes security) (stored 0%)
adding: data/lungData.rda (188 bytes security) (deflated 16%)
adding: data/mouseData.rda (188 bytes security) (deflated 0%)
adding: DESCRIPTION (188 bytes security) (deflated 39%)
adding: doc/ (256 bytes security) (stored 0%)
adding: doc/index.html (188 bytes security) (deflated 58%)
adding: doc/metagenomeSeq.pdf (188 bytes security) (deflated 12%)
adding: doc/metagenomeSeq.R (188 bytes security) (deflated 66%)
adding: doc/metagenomeSeq.Rnw (188 bytes security) (deflated 65%)
adding: extdata/ (256 bytes security) (stored 0%)
adding: extdata/CHK_clinical.csv (188 bytes security) (deflated 87%)
adding: extdata/CHK_NAME.otus.count.csv (188 bytes security) (deflated 96%)
adding: extdata/CHK_otus.taxonomy.csv (188 bytes security) (deflated 87%)
adding: help/ (256 bytes security) (stored 0%)
adding: help/aliases.rds (188 bytes security) (stored 0%)
adding: help/AnIndex (188 bytes security) (deflated 69%)
adding: help/metagenomeSeq.rdb (188 bytes security) (deflated 2%)
adding: help/metagenomeSeq.rdx (188 bytes security) (stored 0%)
adding: help/paths.rds (188 bytes security) (stored 0%)
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adding: Meta/package.rds (188 bytes security) (stored 0%)
adding: Meta/Rd.rds (188 bytes security) (stored 0%)
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adding: NAMESPACE (188 bytes security) (deflated 53%)
adding: NEWS (188 bytes security) (deflated 50%)
adding: R/ (256 bytes security) (stored 0%)
adding: R/metagenomeSeq (188 bytes security) (deflated 41%)
adding: R/metagenomeSeq.rdb (188 bytes security) (deflated 27%)
adding: R/metagenomeSeq.rdx (188 bytes security) (stored 0%)
adding: unitTests/ (256 bytes security) (stored 0%)
adding: unitTests/test_calcNormFactors.R (188 bytes security) (deflated 59%)
adding: unitTests/test_cumNorm.R (188 bytes security) (deflated 25%)
adding: unitTests/test_cumNormStat.R (188 bytes security) (deflated 21%)
adding: unitTests/test_cumNormStatFast.R (188 bytes security) (deflated 23%)