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BioC 3.0: BUILD report for BiocParallel on perceval

This page was generated on 2015-04-10 09:57:33 -0700 (Fri, 10 Apr 2015).

Package 92/933HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocParallel 1.0.3
Bioconductor Package Maintainer
Snapshot Date: 2015-04-09 16:20:12 -0700 (Thu, 09 Apr 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_0/madman/Rpacks/BiocParallel
Last Changed Rev: 99195 / Revision: 102249
Last Changed Date: 2015-02-07 12:52:56 -0800 (Sat, 07 Feb 2015)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK [ OK ] OK  OK 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK 

Summary

Package: BiocParallel
Version: 1.0.3
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel
StartedAt: 2015-04-09 20:13:24 -0700 (Thu, 09 Apr 2015)
EndedAt: 2015-04-09 20:14:21 -0700 (Thu, 09 Apr 2015)
EllapsedTime: 56.3 seconds
RetCode: 0
Status:  OK 
PackageFile: BiocParallel_1.0.3.tar.gz
PackageFileSize: 376.8 KiB

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel
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* checking for file ‘BiocParallel/DESCRIPTION’ ... OK
* preparing ‘BiocParallel’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX .
Creating pdf output from LaTeX ...

This is pdfTeX, Version 3.14159265-2.6-1.40.15 (TeX Live 2014) (preloaded format=pdflatex)
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ne

pdfTeX warning (dest): name{Rfn.clusterMap} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.foreach.Rdash.package} has been referenced but 
does not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.pvec} has been referenced but does not exist, r
eplaced by a fixed one

pdfTeX warning (dest): name{Rfn.mapply} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.mclapply} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lapply} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.simplify2array} has been referenced but does no
t exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.aggregate} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.ClusterFunctions} has been referenced but does 
not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.makeRegistry} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getwd} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.loadRegistry} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.try} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.submitJobs} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.chunk} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.parallel} has been referenced but does not exis
t, replaced by a fixed one

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Output written on Rd2.pdf (29 pages, 156536 bytes).
Transcript written on Rd2.log.
Saving output to ‘/private/tmp/RtmpW6bzb0/Rbuild7fba6a002620/BiocParallel/build/BiocParallel.pdf’ ...
Done
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building ‘BiocParallel_1.0.3.tar.gz’