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Package 370/514HostnameOS / ArchBUILDCHECKBUILD BIN
phenoTest 1.2.0
Evarist Planet
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/phenoTest
Last Changed Rev: 59920 / Revision: 64395
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: phenoTest
Version: 1.2.0
Command: rm -rf phenoTest.buildbin-libdir && mkdir phenoTest.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=phenoTest.buildbin-libdir phenoTest_1.2.0.tar.gz
StartedAt: 2012-03-24 04:00:35 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 04:01:33 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 58.5 seconds
RetCode: 0
Status:  OK  
PackageFile: phenoTest_1.2.0.zip
PackageFileSize: 1.187 MiB

Command output


install for i386

* installing *source* package 'phenoTest' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c getEs.c -o getEs.o
gcc -shared -s -static-libgcc -o phenoTest.dll tmp.def getEs.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/phenoTest.buildbin-libdir/phenoTest/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'phenoTest.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'phenoTest' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c getEs.c -o getEs.o
gcc -m64 -shared -s -static-libgcc -o phenoTest.dll tmp.def getEs.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/phenoTest.buildbin-libdir/phenoTest/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'phenoTest' as phenoTest_1.2.0.zip

* DONE (phenoTest)