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Package 204/479HostnameOS / ArchBUILDCHECKBUILD BIN
girafe 1.5.2
J. Toedling
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/girafe
Last Changed Rev: 56583 / Revision: 56603
Last Changed Date: 2011-07-06 01:47:14 -0700 (Wed, 06 Jul 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: girafe
Version: 1.5.2
Command: mkdir girafe.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=girafe.buildbin-libdir girafe_1.5.2.tar.gz
StartedAt: 2011-07-07 06:59:25 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 07:00:26 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 60.9 seconds
RetCode: 0
Status:  OK  
PackageFile: girafe_1.5.2.zip
PackageFileSize: 1.548 MiB

Command output


install for i386

* installing *source* package 'girafe' ...
** libs
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -mtune=core2 -c coverage.cpp -o coverage.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c girafe_init.c -o girafe_init.o
g++ -shared -s -static-libgcc -o girafe.dll tmp.def coverage.o girafe_init.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/girafe.buildbin-libdir/girafe/libs/i386
** R
** inst
** preparing package for lazy loading

Attaching package: 'IRanges'

The following object(s) are masked from 'package:base':

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: GenomicRanges
Loading required package: Biostrings
Loading required package: lattice
Loading required package: latticeExtra
Loading required package: RColorBrewer

Attaching package: 'intervals'

The following object(s) are masked from 'package:Biostrings':

    type

The following object(s) are masked from 'package:IRanges':

    reduce


Attaching package: 'genomeIntervals'

The following object(s) are masked from 'package:GenomicRanges':

    strand, strand<-

Creating a generic function for "plot" from package "graphics" in package "girafe"
Creating a generic function for "hist" from package "graphics" in package "girafe"
Creating a generic function for "sample" from package "base" in package "girafe"
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'girafe.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'girafe' ...
** libs
x86_64-w64-mingw32-g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -mtune=core2 -c coverage.cpp -o coverage.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -std=gnu99 -mtune=core2 -c girafe_init.c -o girafe_init.o
x86_64-w64-mingw32-g++ -shared -s -static-libgcc -o girafe.dll tmp.def coverage.o girafe_init.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/girafe.buildbin-libdir/girafe/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'girafe' as girafe_1.5.2.zip

* DONE (girafe)