Package: Starr

Version: 1.9.2

Command: chmod a+r Starr -R && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Starr

StartedAt: 2011-07-07 03:25:10 -0700 (Thu, 07 Jul 2011)

EndedAt: 2011-07-07 03:25:18 -0700 (Thu, 07 Jul 2011)

EllapsedTime: 8.2 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

* checking for file 'Starr/DESCRIPTION' ... OK
* preparing 'Starr':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
      -----------------------------------
* installing *source* package 'Starr' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB         -O3 -Wall  -std=gnu99 -mtune=core2 -c ahocorasick.c -o ahocorasick.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB         -O3 -Wall  -std=gnu99 -mtune=core2 -c collect.c -o collect.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB         -O3 -Wall  -std=gnu99 -mtune=core2 -c rm_small_peak.c -o rm_small_peak.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -DHAVE_ZLIB         -O3 -Wall  -std=gnu99 -mtune=core2 -c sort_by_genomic.c -o sort_by_genomic.o
gcc -shared -s -static-libgcc -o Starr.dll tmp.def ahocorasick.o collect.o rm_small_peak.o sort_by_genomic.o -lRzlib -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
ahocorasick.o:ahocorasick.c:(.text+0x104): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0x189b): undefined reference to `gzopen'
ahocorasick.o:ahocorasick.c:(.text+0x1c26): undefined reference to `gzclose'
ahocorasick.o:ahocorasick.c:(.text+0x1f0c): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0x1f5d): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0x1fcd): undefined reference to `gzread'
ahocorasick.o:ahocorasick.c:(.text+0x2030): undefined reference to `gzread'
collect2: ld returned 1 exit status
ERROR: compilation failed for package 'Starr'
* removing 'D:/biocbld/bbs-2.9-bioc/tmpdir/Rtmp4k4o19/Rinst539a1ed7/Starr'
      -----------------------------------
ERROR: package installation failed