Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N [O] P  Q  R  S  T  U  V  W  X  Y  Z 

Package 325/479HostnameOS / ArchBUILDCHECKBUILD BIN
OLIN 1.31.0
Matthias Futschik
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/OLIN
Last Changed Rev: 54810 / Revision: 56603
Last Changed Date: 2011-04-13 18:14:51 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: OLIN
Version: 1.31.0
Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch OLIN_1.31.0.tar.gz
StartedAt: 2011-07-07 04:43:49 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 04:46:18 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 149.5 seconds
RetCode: 0
Status:  OK 
CheckDir: OLIN.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.9-bioc/meat/OLIN.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-22 r56208)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'OLIN/DESCRIPTION' ... OK
* this is package 'OLIN' version '1.31.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'OLIN' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... NOTE
  
  Note: significantly better compression could be obtained
        by using tools::resaveRdaFiles() or R CMD build --resave-data
                old_size new_size compress
  sw.RData         292Kb    212Kb       xz
  sw.olin.RData    295Kb    259Kb       xz
  sw.xy.RData       35Kb     20Kb       xz
* checking sizes of PDF files under 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

OLIN.Rcheck/00install.out:

* installing *source* package 'OLIN' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: akima
Loading required package: lattice
locfit 1.5-6 	 2010-01-20 
Loading required package: limma
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'OLIN.Rnw' 
** testing if installed package can be loaded
locfit 1.5-6 	 2010-01-20 

* DONE (OLIN)

OLIN.Rcheck/OLIN-Ex.timings:

nameusersystemelapsed
anovaint0.3510.0590.412
anovapin0.2960.0550.358
anovaplate0.2510.0510.304
anovaspatial0.6620.1200.792
backgroundCorrect21.2010.1751.384
bas0.0820.0140.097
colorbar.mxy0.1020.0190.122
fdr.int0.0010.0000.001
fdr.int20.0010.0000.000
fdr.spatial0.0010.0010.001
fdr.spatial20.0000.0000.001
fgbg.visu0.2500.0370.294
ino0.4980.1500.660
lin1.7900.3802.256
m2v0.1250.0230.149
ma.matrix0.7310.0330.766
ma.vector0.8490.0510.906
mxy.abs.plot0.1530.0240.192
mxy.plot0.1520.0390.192
mxy2.plot0.1250.0240.151
oin2.3590.4182.871
olin51.254 5.37757.267
p.int0.0000.0000.001
p.int20.0010.0000.000
p.spatial0.0010.0000.001
p.spatial20.0000.0000.001
sig.mask0.0000.0000.001
sigint.plot000
sigint.plot2000
sigxy.plot000
sigxy.plot20.0000.0000.001
v2m0.0780.0080.094