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Package 322/479HostnameOS / ArchBUILDCHECKBUILD BIN
OCplus 1.27.0
Alexander Ploner
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/OCplus
Last Changed Rev: 54802 / Revision: 56603
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: OCplus
Version: 1.27.0
Command: mkdir OCplus.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=OCplus.buildbin-libdir OCplus_1.27.0.tar.gz >OCplus-install.out 2>&1 && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --library=OCplus.buildbin-libdir --install="check:OCplus-install.out" --force-multiarch --no-vignettes --timings OCplus_1.27.0.tar.gz && mv OCplus.buildbin-libdir/* OCplus.Rcheck/ && rmdir OCplus.buildbin-libdir
StartedAt: 2011-07-07 05:48:08 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 05:50:00 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 111.9 seconds
RetCode: 0
Status:  OK  
CheckDir: OCplus.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/OCplus.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-20 r56188)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'OCplus/DESCRIPTION' ... OK
* this is package 'OCplus' version '1.27.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'OCplus' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: tstatistics.Rd:38-39: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

OCplus.Rcheck/00install.out:


install for i386

* installing *source* package 'OCplus' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'OCplus.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'OCplus' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OCplus' as OCplus_1.27.0.zip

* DONE (OCplus)

OCplus.Rcheck/OCplus-Ex.timings:

nameusersystemelapsed
EOC1.220.001.22
FDR000
MAsim.smyth0.370.000.37
OCshow1.890.001.89
TOC0.560.000.56
average.fdr1.560.021.68
fdr1d0.550.000.54
fdr2d0.870.000.88
plot.FDR.result0.190.000.18
plot.fdr1d.result0.560.000.72
plot.fdr2d.result0.900.000.92
samplesize13.37 0.0613.50
smooth1d0.210.000.20
summary.fdr.result0.850.000.87
tMixture5.930.116.04