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Package 401/436HostnameOS / ArchBUILDCHECKBUILD BIN
spkTools 1.7.0
Matthew N McCall
Snapshot Date: 2011-02-24 11:26:35 -0800 (Thu, 24 Feb 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/spkTools
Last Changed Rev: 50295 / Revision: 53255
Last Changed Date: 2010-10-17 22:57:44 -0700 (Sun, 17 Oct 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.4) / i386  OK [ OK ] OK 

Summary

Package: spkTools
Version: 1.7.0
Command: /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch spkTools_1.7.0.tar.gz
StartedAt: 2011-02-24 17:01:31 -0800 (Thu, 24 Feb 2011)
EndedAt: 2011-02-24 17:03:00 -0800 (Thu, 24 Feb 2011)
EllapsedTime: 88.3 seconds
RetCode: 0
Status:  OK 
CheckDir: spkTools.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.8-bioc/meat/spkTools.Rcheck'
* using R version 2.13.0 Under development (unstable) (2011-01-10 r53950)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'spkTools/DESCRIPTION' ... OK
* this is package 'spkTools' version '1.7.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'spkTools' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

spkTools.Rcheck/00install.out:

* installing *source* package 'spkTools' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (spkTools)

spkTools.Rcheck/spkTools-Ex.timings:

nameusersystemelapsed
SpikeInExpressSet-class0.4030.0040.407
plotSpkBox1.1430.0281.172
spkAccSD0.4910.0130.505
spkAll20.798 0.17420.985
spkAnova0.1700.0060.177
spkBal0.1820.0020.184
spkBox1.1460.1781.324
spkDensity0.2960.0040.299
spkGNN6.8320.1626.995
spkMA1.9490.0532.002
spkPair0.2840.0130.298
spkPairNS0.2170.0070.225
spkPot1.0270.0371.064
spkQuantile0.1670.0020.170
spkSlope0.1650.0040.169
spkTools22.067 0.58422.651
spkVar0.1400.0020.141
summarySpkBox1.0160.0331.049