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Package 335/436HostnameOS / ArchBUILDCHECKBUILD BIN
RbcBook1 1.19.1
Vince Carey
Snapshot Date: 2011-02-24 11:26:35 -0800 (Thu, 24 Feb 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/RbcBook1
Last Changed Rev: 51561 / Revision: 53255
Last Changed Date: 2010-12-15 15:12:44 -0800 (Wed, 15 Dec 2010)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.4) / i386  OK [ OK ] OK 

Summary

Package: RbcBook1
Version: 1.19.1
Command: /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch RbcBook1_1.19.1.tar.gz
StartedAt: 2011-02-24 16:37:46 -0800 (Thu, 24 Feb 2011)
EndedAt: 2011-02-24 16:38:13 -0800 (Thu, 24 Feb 2011)
EllapsedTime: 26.9 seconds
RetCode: 0
Status:  OK 
CheckDir: RbcBook1.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.8-bioc/meat/RbcBook1.Rcheck'
* using R version 2.13.0 Under development (unstable) (2011-01-10 r53950)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'RbcBook1/DESCRIPTION' ... OK
* this is package 'RbcBook1' version '1.19.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'RbcBook1' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
bcStangle: possible error in grep("chapter{", txt,
  extended = FALSE): unused argument(s) (extended =
  FALSE)
checkPackage: possible error in sub("Rpackage{", "",
  sub("}", "", unique(p), extended = FALSE), extended
  = FALSE): unused argument(s) (extended = FALSE)
checkPackage: possible error in sub("}", "",
  unique(p), extended = FALSE): unused argument(s)
  (extended = FALSE)
checkRnw: possible error in
  grep("caption.*%.*[a-zA-Z]", txt, extended =
  FALSE): unused argument(s) (extended = FALSE)
remapAff: no visible binding for global variable
  'hgu95av2SYMBOL'
* checking Rd files ... NOTE
prepare_Rd: requireAllBook1.Rd:9-10: Dropping empty section \arguments
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... NOTE
'library' or 'require' call not declared from: rpart
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

RbcBook1.Rcheck/00install.out:

* installing *source* package 'RbcBook1' ...
** R
** data
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (RbcBook1)

RbcBook1.Rcheck/RbcBook1-Ex.timings:

nameusersystemelapsed
bcStangle0.0000.0000.001
bcSweave000
bcr0.6580.0230.681
checkVerbatimLines0.0080.0000.008
imageSize000
perf0.0020.0000.002
requireAllBook10.0000.0010.000
rpart2gNEL0.1290.0120.153