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Package 6/389HostnameOS / ArchBUILDCHECKBUILD BIN
affy 1.26.1
Rafael A. Irizarry
Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/affy
Last Changed Rev: 46757 / Revision: 49923
Last Changed Date: 2010-05-08 13:59:15 -0700 (Sat, 08 May 2010)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: affy
Version: 1.26.1
Command: chmod a+r affy -R && E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD build affy
StartedAt: 2010-10-04 13:32:44 -0700 (Mon, 04 Oct 2010)
EndedAt: 2010-10-04 13:35:36 -0700 (Mon, 04 Oct 2010)
EllapsedTime: 172.0 seconds
RetCode: 0
Status:  OK  
PackageFile: affy_1.26.1.tar.gz
PackageFileSize: 1.694 MiB

Command output

* checking for file 'affy/DESCRIPTION' ... OK
* preparing 'affy':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* installing *source* package 'affy' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
  making DLL ...
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -DHAVE_ZLIB  -I"E:/biocbld/bbs-2.6-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c chipbackground.c -o chipbackground.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -DHAVE_ZLIB  -I"E:/biocbld/bbs-2.6-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c getall_locations.c -o getall_locations.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -DHAVE_ZLIB  -I"E:/biocbld/bbs-2.6-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c mas5calls.c -o mas5calls.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -DHAVE_ZLIB  -I"E:/biocbld/bbs-2.6-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c rma2.c -o rma2.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include" -DHAVE_ZLIB  -I"E:/biocbld/bbs-2.6-bioc/R/library/preprocessCore/include"      -O3 -Wall  -std=gnu99 -c rma_common.c -o rma_common.o
gcc -shared -s -static-libgcc -o affy.dll tmp.def chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -lRzlib -LE:/biocbld/bbs-2.6-bioc/R/bin -lR
installing to E:/biocbld/bbs-2.6-bioc/tmpdir/Rinst537219723/affy/libs
  ... done
** R
** data
** demo
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Creating a new generic function for "open" in "affy"
Creating a new generic function for "close" in "affy"
Creating a new generic function for "colnames" in "affy"
Creating a new generic function for "barplot" in "affy"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (affy)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'affy_1.26.1.tar.gz'