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Package 86/354HostnameOS / ArchBUILDCHECKBUILD BIN
crlmm 1.5.11
Benilton S Carvalho , Robert Scharpf , Matt Ritchie
Bioconductor Changelog
Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm
Last Changed Rev: 43392 / Revision: 43434
Last Changed Date: 2009-12-04 10:21:42 -0800 (Fri, 04 Dec 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] WARNINGS  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 
Package: crlmm
Version: 1.5.11
Command: E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD build crlmm
StartedAt: 2009-12-07 15:10:31 -0800 (Mon, 07 Dec 2009)
EndedAt: 2009-12-07 15:12:44 -0800 (Mon, 07 Dec 2009)
EllapsedTime: 132.3 seconds
RetCode: 0
Status: OK
PackageFile: crlmm_1.5.11.tar.gz
PackageFileSize: 2.043 MiB

Command output

* checking for file 'crlmm/DESCRIPTION' ... OK
* preparing 'crlmm':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* installing *source* package 'crlmm' ...
** libs
  making DLL ...
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c gtypeCaller.c -o gtypeCaller.o
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c init.c -o init.o
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c trimmed.c -o trimmed.o
gcc -I"e:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c utils.c -o utils.o
utils.c: In function 'mad_median':
utils.c:124: warning: unused variable 'n_ignore'
gcc -shared -s -o crlmm.dll tmp.def gtypeCaller.o init.o trimmed.o utils.o -Le:/biocbld/bbs-2.6-bioc/R/bin -lR
  ... done
** R
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Welcome to oligoClasses version 1.9.14

Attaching package: 'IRanges'


	The following object(s) are masked from package:oligoClasses :

	 rangedData,
	 rangedData<- 


	The following object(s) are masked from package:Biobase :

	 updateObject 


	The following object(s) are masked from package:base :

	 Map,
	 cbind,
	 mapply,
	 order,
	 pmax,
	 pmax.int,
	 pmin,
	 pmin.int,
	 rbind,
	 rep.int,
	 table 

Creating a new generic function for "ellipse" in "crlmm"
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (crlmm)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'crlmm_1.5.11.tar.gz'