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Package 140/354HostnameOS / ArchBUILDCHECKBUILD BIN
GeneticsPed 1.9.0
The R Genetics Project
Bioconductor Changelog
Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GeneticsPed
Last Changed Rev: 42686 / Revision: 43434
Last Changed Date: 2009-10-27 16:45:24 -0700 (Tue, 27 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: GeneticsPed
Version: 1.9.0
Command: E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD INSTALL --build --library=GeneticsPed.buildbin-libdir GeneticsPed_1.9.0.tar.gz
StartedAt: 2009-12-07 19:02:24 -0800 (Mon, 07 Dec 2009)
EndedAt: 2009-12-07 19:02:39 -0800 (Mon, 07 Dec 2009)
EllapsedTime: 14.2 seconds
RetCode: 0
Status: OK
PackageFile: GeneticsPed_1.9.0.zip
PackageFileSize: 615 KiB

Command output

* installing *source* package 'GeneticsPed' ...
** libs
  making DLL ...
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c ainverse.cc -o ainverse.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c eibd.cc -o eibd.o
gfortran     -O3  -c ggmatmult.f -o ggmatmult.o
gfortran     -O3  -c gpi.f -o gpi.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c inbreed.cc -o inbreed.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c inverseAdditive.cc -o inverseAdditive.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c meuwissen.cc -o meuwissen.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c pedSort.cc -o pedSort.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c pedtemplate.cc -o pedtemplate.o
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c register.cc -o register.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O3 -Wall  -std=gnu99 -c sargolzaei.c -o sargolzaei.o
sargolzaei.c: In function 'sargolzaei':
sargolzaei.c:96: warning: comparison between pointer and integer
sargolzaei.c:19: warning: 'S' may be used uninitialized in this function
sargolzaei.c:19: warning: 'MIP' may be used uninitialized in this function
g++ -I"E:/biocbld/bbs-2.6-bioc/R/include"        -O2 -Wall  -c sortped.cc -o sortped.o
g++ -shared -s -o GeneticsPed.dll tmp.def ainverse.o eibd.o ggmatmult.o gpi.o inbreed.o inverseAdditive.o meuwissen.o pedSort.o pedtemplate.o register.o sargolzaei.o sortped.o -lgfortran -LE:/biocbld/bbs-2.6-bioc/R/bin -lR
  ... done
** R
** data
** inst
** preparing package for lazy loading

Attaching package: 'gdata'


	The following object(s) are masked from package:utils :

	 object.size 

Loading required package: combinat

Attaching package: 'combinat'


	The following object(s) are masked from package:utils :

	 combn 

Loading required package: gtools
Loading required package: MASS
Loading required package: mvtnorm

NOTE: THIS PACKAGE IS NOW OBSOLETE.

  The R-Genetics project has developed an set of enhanced genetics
  packages to replace 'genetics'. Please visit the project homepage
  at http://rgenetics.org for informtion.


Attaching package: 'genetics'


	The following object(s) are masked from package:base :

	 %in%,
	 as.factor,
	 order 

** help
*** installing help indices
** building package indices ...
** MD5 sums
packaged installation of 'GeneticsPed' as GeneticsPed_1.9.0.zip
* DONE (GeneticsPed)