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Package 311/319HostnameOS / ArchBUILDCHECKBUILD BIN
vsn 3.12.0
Wolfgang Huber
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/vsn
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK [ OK ]
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: vsn
Version: 3.12.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh vsn_3.12.0.tar.gz /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R vsn.buildbin-libdir
StartedAt: 2009-10-20 19:39:06 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 19:39:17 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 10.8 seconds
RetCode: 0
Status: OK
PackageFile: vsn_3.12.0.tgz
PackageFileSize: 1.259 MiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --preclean --library=vsn.buildbin-libdir vsn_3.12.0.tar.gz'

* Installing *source* package ‘vsn’ ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c init.c -o init.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c vsn.c -o vsn.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c vsn2.c -o vsn2.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o vsn.so init.o vsn.o vsn2.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c init.c -o init.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c vsn.c -o vsn.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c vsn2.c -o vsn2.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o vsn.so init.o vsn.o vsn2.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Creating a new generic function for "logLik" in "vsn"
Creating a new generic function for "coef" in "vsn"
Creating a new generic function for "coefficients" in "vsn"
** help
*** installing help indices
 >>> Building/Updating help pages for package 'vsn'
     Formats: text html latex example 
  class.vsn                         text    html    latex   example
  class.vsnInput                    text    html    latex
  getIntensityMatrix                text    html    latex   example
  justvsn                           text    html    latex   example
  kidney                            text    html    latex   example
  lymphoma                          text    html    latex   example
  meanSdPlot                        text    html    latex   example
  normalize.AffyBatch.vsn           text    html    latex   example
  sagmbSimulateData                 text    html    latex   example
  scalingFactorTransformation       text    html    latex   example
  vsn-package                       text    html    latex
  vsn                               text    html    latex   example
  vsn2                              text    html    latex   example
  vsn2trsf                          text    html    latex   example
  vsnLikelihood                     text    html    latex   example
  vsnPlotPar                        text    html    latex   example
  vsnh                              text    html    latex   example
** building package indices ...
* DONE (vsn)