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Package 157/319HostnameOS / ArchBUILDCHECKBUILD BIN
iterativeBMAsurv 1.2.0
Ka Yee Yeung
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/iterativeBMAsurv
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: iterativeBMAsurv
Version: 1.2.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD check --no-vignettes iterativeBMAsurv_1.2.0.tar.gz
StartedAt: 2009-10-20 17:24:05 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 17:25:39 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 93.5 seconds
RetCode: 0
Status: OK
CheckDir: iterativeBMAsurv.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.4-bioc/meat/iterativeBMAsurv.Rcheck'
* using R version 2.9.2 (2009-08-24)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'iterativeBMAsurv/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'iterativeBMAsurv' version '1.2.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'iterativeBMAsurv' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

iterativeBMAsurv.Rcheck/00install.out:

* Installing *source* package 'iterativeBMAsurv' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: survival
Loading required package: splines
Loading required package: leaps
** help
*** installing help indices
 >>> Building/Updating help pages for package 'iterativeBMAsurv'
     Formats: text html latex example chm 
  crossVal                          text    html    latex   example chm
  imageplot.iterate.bma.surv        text    html    latex   example chm
  iterateBMAsurv.train              text    html    latex   example chm
  iterateBMAsurv.train.predict.asse text    html    latex   example chm
  iterateBMAsurv.train.wrapper      text    html    latex   example chm
  iterativeBMAsurv-internal         text    html    latex           chm
  iterativeBMAsurv-package          text    html    latex   example chm
Note: removing empty section \note in file 'predictBicSurv.Rd'
Note: removing empty section \note in file 'predictBicSurv.Rd'
  predictBicSurv                    text    html    latex   example chm
Note: removing empty section \note in file 'predictiveAssessCategory.Rd'
Note: removing empty section \note in file 'predictiveAssessCategory.Rd'
  predictiveAssessCategory          text    html    latex   example chm
Note: removing empty section \note in file 'printTopGenes.Rd'
Note: removing empty section \note in file 'printTopGenes.Rd'
  printTopGenes                     text    html    latex   example chm
Note: removing empty section \note in file 'singleGeneCoxph.Rd'
Note: removing empty section \note in file 'singleGeneCoxph.Rd'
  singleGeneCoxph                   text    html    latex   example chm
Note: removing empty section \details in file 'testCens.Rd'
Note: removing empty section \details in file 'testCens.Rd'
  testCens                          text    html    latex           chm
  testData                          text    html    latex           chm
Note: removing empty section \details in file 'testSurv.Rd'
Note: removing empty section \details in file 'testSurv.Rd'
  testSurv                          text    html    latex           chm
Note: removing empty section \details in file 'trainCens.Rd'
Note: removing empty section \details in file 'trainCens.Rd'
  trainCens                         text    html    latex           chm
  trainData                         text    html    latex           chm
Note: removing empty section \details in file 'trainSurv.Rd'
Note: removing empty section \details in file 'trainSurv.Rd'
  trainSurv                         text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\BBS-2~1.4-B\meat\ITERAT~2.RCH\00_PKG~1\ITERAT~1\chm\iterativeBMAsurv.chm


Compile time: 0 minutes, 1 second
18	Topics
113	Local links
10	Internet links
1	Graphic


Created e:\biocbld\BBS-2~1.4-B\meat\ITERAT~2.RCH\00_PKG~1\ITERAT~1\chm\iterativeBMAsurv.chm, 48,539 bytes
Compression decreased file by 45,194 bytes.
** building package indices ...
** MD5 sums
* DONE (iterativeBMAsurv)