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Package 104/319HostnameOS / ArchBUILDCHECKBUILD BIN
gaga 1.4.0
David Rossell
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/gaga
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: gaga
Version: 1.4.0
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD build gaga
StartedAt: 2009-10-20 16:03:57 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 16:04:26 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 28.9 seconds
RetCode: 0
Status: OK
PackageFile: gaga_1.4.0.tar.gz
PackageFileSize: 275.8 KiB

Command output

* checking for file 'gaga/DESCRIPTION' ... OK
* preparing 'gaga':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package ‘gaga’ ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c cseqdesma.c -o cseqdesma.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c cstat.c -o cstat.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o gaga.so cseqdesma.o cstat.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c cseqdesma.c -o cseqdesma.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c cstat.c -o cstat.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o gaga.so cseqdesma.o cstat.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** inst
** help
*** installing help indices
 >>> Building/Updating help pages for package 'gaga'
     Formats: text html latex example 
Note: removing empty section \examples in file 'checkfit.Rd'
  checkfit                          text    html    latex
  classpred                         text    html    latex   example
Note: removing empty section \examples in file 'dcgamma.Rd'
  dcgamma                           text    html    latex
  findgenes                         text    html    latex   example
  fitGG                             text    html    latex   example
  geneclus                          text    html    latex   example
Note: removing empty section \examples in file 'getpar.Rd'
  getpar                            text    html    latex
  parest                            text    html    latex   example
Note: removing empty section \examples in file 'posmeansGG.Rd'
  posmeansGG                        text    html    latex
Note: removing empty section \examples in file 'powclasspred.Rd'
  powclasspred                      text    html    latex
Note: removing empty section \details in file 'print.gagaclus.Rd'
  print.gagaclus                    text    html    latex
  print.gagafit                     text    html    latex
Note: removing empty section \details in file 'print.gagahyp.Rd'
  print.gagahyp                     text    html    latex
  simGG                             text    html    latex   example
Note: removing empty section \examples in file 'simnewsamples.Rd'
  simnewsamples                     text    html    latex
** building package indices ...
* DONE (gaga)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'gaga_1.4.0.tar.gz'