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Package 96/319HostnameOS / ArchBUILDCHECKBUILD BIN
flagme 1.0.0
Mark Robinson
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/flagme
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: flagme
Version: 1.0.0
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD build flagme
StartedAt: 2009-10-20 16:21:20 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 16:21:50 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 30.3 seconds
RetCode: 0
Status: OK
PackageFile: flagme_1.0.0.tar.gz
PackageFileSize: 301.1 KiB

Command output

* checking for file 'flagme/DESCRIPTION' ... OK
* preparing 'flagme':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package ‘flagme’ ...
** libs
** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c dp.c -o dp.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/i386  -I/usr/local/include    -fPIC  -mtune=core2 -g -O2 -c init.c -o init.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o flagme.so dp.o init.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c dp.c -o dp.o
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include -I/Library/Frameworks/R.framework/Versions/2.9/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c init.c -o init.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -mmacosx-version-min=10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o flagme.so dp.o init.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
Package SparseM (0.80) loaded.  
	   To cite, see citation("SparseM")


Attaching package: 'SparseM'


	The following object(s) are masked from package:stats :

	 model.response 


	The following object(s) are masked from package:base :

	 backsolve,
	 chol 

Warning in namespaceImportFrom(self, asNamespace(ns)) :
  replacing previous import: image
Warning in namespaceImportFrom(self, asNamespace(ns)) :
  replacing previous import: image
Creating a new generic function for "plot" in "flagme"
** help
*** installing help indices
 >>> Building/Updating help pages for package 'flagme'
     Formats: text html latex example 
  addAMDISPeaks                     text    html    latex   example
  addChromaTOFPeaks                 text    html    latex   example
  betweenAlignment                  text    html    latex   example
  calcTimeDiffs                     text    html    latex   example
  clusterAlignment                  text    html    latex   example
  compress                          text    html    latex   example
  dp                                text    html    latex   example
  gatherInfo                        text    html    latex   example
  imputePeaks                       text    html    latex   example
  multipleAlignment                 text    html    latex   example
  normDotProduct                    text    html    latex   example
  parseChromaTOF                    text    html    latex   example
  parseELU                          text    html    latex   example
  peaksAlignment                    text    html    latex   example
  peaksDataset                      text    html    latex   example
  plot                              text    html    latex   example
  plotImage                         text    html    latex   example
  progressiveAlignment              text    html    latex   example
  rmaFitUnit                        text    html    latex   example
** building package indices ...
* DONE (flagme)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'flagme_1.0.0.tar.gz'