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Package 309/319HostnameOS / ArchBUILDCHECKBUILD BIN
VanillaICE 1.6.0
Robert Scharpf
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/VanillaICE
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64 [ OK ] OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: VanillaICE
Version: 1.6.0
Command: /home/biocbuild/bbs-2.4-bioc/R/bin/R CMD build VanillaICE
StartedAt: 2009-10-20 14:26:57 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 14:27:17 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 20.5 seconds
RetCode: 0
Status: OK
PackageFile: VanillaICE_1.6.0.tar.gz
PackageFileSize: 1.815 MiB

Command output

* checking for file 'VanillaICE/DESCRIPTION' ... OK
* preparing 'VanillaICE':
* checking DESCRIPTION meta-information ... OK
* cleaning src
make: Nothing to be done for `clean'.
* installing the package to re-build vignettes
* Installing *source* package 'VanillaICE' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.4-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c viterbi.c -o viterbi.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o VanillaICE.so viterbi.o -lm -L/home/biocbuild/bbs-2.4-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
Creating a new generic function for "update" in "VanillaICE"
** help
*** installing help indices
 >>> Building/Updating help pages for package 'VanillaICE'
     Formats: text html latex example 
  breaks                            text    html    latex   example
  copynumberEmission                text    html    latex
  genotypeEmission                  text    html    latex
  genotypeEmissionCrlmm             text    html    latex
  hmm                               text    html    latex
  locusLevelData                    text    html    latex   example
  transitionProbability             text    html    latex
  viterbi                           text    html    latex
** building package indices ...
* DONE (VanillaICE)
* creating vignettes ... OK
* cleaning src
make: Nothing to be done for `clean'.
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'VanillaICE/inst/testing' is empty
* building 'VanillaICE_1.6.0.tar.gz'