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Neve2006 0.1.6
VJ Carey
Snapshot Date: 2009-04-10 00:03:00 -0700 (Fri, 10 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/Neve2006
Last Changed Rev: 737 / Revision: 760
Last Changed Date: 2008-10-30 14:43:37 -0700 (Thu, 30 Oct 2008)
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: Neve2006
Version: 0.1.6
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes Neve2006_0.1.6.tar.gz
StartedAt: 2009-04-10 02:39:12 -0700 (Fri, 10 Apr 2009)
EndedAt: 2009-04-10 02:40:22 -0700 (Fri, 10 Apr 2009)
EllapsedTime: 69.5 seconds
RetCode: 0
Status: OK
CheckDir: Neve2006.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-data-experiment/meat/Neve2006.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'Neve2006/DESCRIPTION' ... OK
* this is package 'Neve2006' version '0.1.6'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Neve2006' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating Neve2006-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating Neve2006-manual.tex ... OK
* checking Neve2006-manual.tex using pdflatex ... OK

Neve2006.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-data-experiment/meat/Neve2006.Rcheck


---------- Making package Neve2006 ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package Neve2006 for lazy loading
Loading required package: tools
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: hgu133a.db
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: annotate
Loading required package: xtable
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'Neve2006'
     Formats: text html latex example chm 
  cghExSet-class                    text    html    latex   example chm
  logRatios                         text    html    latex   example chm
  neveCGHmatch                      text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-data-experiment\meat\Neve2006.Rcheck\00_pkg_src\Neve2006\chm\Neve2006.chm


Compile time: 0 minutes, 0 seconds
4	Topics
21	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.3-data-experiment\meat\Neve2006.Rcheck\00_pkg_src\Neve2006\chm\Neve2006.chm, 19,705 bytes
Compression increased file by 995 bytes.
  adding MD5 sums

* DONE (Neve2006)