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Package 3/64HostnameOS / ArchBUILDCHECKBUILD BIN
ALL 1.4.4
Xiaochun Li
Snapshot Date: 2009-04-10 00:03:00 -0700 (Fri, 10 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ALL
Last Changed Rev: 670 / Revision: 760
Last Changed Date: 2008-06-10 09:44:29 -0700 (Tue, 10 Jun 2008)
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: ALL
Version: 1.4.4
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes ALL_1.4.4.tar.gz
StartedAt: 2009-04-10 02:00:11 -0700 (Fri, 10 Apr 2009)
EndedAt: 2009-04-10 02:00:55 -0700 (Fri, 10 Apr 2009)
EllapsedTime: 43.4 seconds
RetCode: 0
Status: OK
CheckDir: ALL.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-data-experiment/meat/ALL.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'ALL/DESCRIPTION' ... OK
* this is package 'ALL' version '1.4.4'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ALL' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating ALL-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating ALL-manual.tex ... OK
* checking ALL-manual.tex using pdflatex ... OK

ALL.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-data-experiment/meat/ALL.Rcheck


---------- Making package ALL ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package ALL for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  installing man source files
  installing indices
Loading required package: methods
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'ALL'
     Formats: text html latex example chm 
  ALL                               text    html    latex   example chm
  tojulian                          text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-data-experiment\meat\ALL.Rcheck\00_pkg_src\ALL\chm\ALL.chm


Compile time: 0 minutes, 0 seconds
3	Topics
4	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.3-data-experiment\meat\ALL.Rcheck\00_pkg_src\ALL\chm\ALL.chm, 19,516 bytes
Compression increased file by 7,894 bytes.
  adding MD5 sums

* DONE (ALL)