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BioC experimental data: CHECK report for geneLenDataBase on perceval

This page was generated on 2014-04-04 17:29:13 -0700 (Fri, 04 Apr 2014).

Package 71/181HostnameOS / ArchBUILDCHECKBUILD BIN
geneLenDataBase 0.99.12
Matthew Young , Nadia Davidson
Snapshot Date: 2014-04-04 06:15:32 -0700 (Fri, 04 Apr 2014)
URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_2_13/experiment/pkgs/geneLenDataBase
Last Changed Rev: 2533 / Revision: 2768
Last Changed Date: 2013-10-14 15:00:20 -0700 (Mon, 14 Oct 2013)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  WARNINGS 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK [ WARNINGS ] OK 

Summary

Package: geneLenDataBase
Version: 0.99.12
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch geneLenDataBase_0.99.12.tar.gz
StartedAt: 2014-04-04 11:00:37 -0700 (Fri, 04 Apr 2014)
EndedAt: 2014-04-04 11:11:20 -0700 (Fri, 04 Apr 2014)
EllapsedTime: 643.9 seconds
RetCode: 0
Status:  WARNINGS 
CheckDir: geneLenDataBase.Rcheck
Warnings: 1

Command output

* using log directory ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck’
* using R version 3.0.3 (2014-03-06)
* using platform: x86_64-apple-darwin10.8.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘geneLenDataBase/DESCRIPTION’ ... OK
* this is package ‘geneLenDataBase’ version ‘0.99.12’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘geneLenDataBase’ can be installed ... [29s/47s] OK
* checking installed package size ... NOTE
  installed size is 100.3Mb
  sub-directories of 1Mb or more:
    data  99.7Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
‘:::’ call which should be ‘::’: ‘GenomicFeatures:::supportedUCSCtables’
  See the note in ?`:::` about the use of this operator.
Unexported object imported by a ‘:::’ call: ‘GenomicFeatures:::.UCSC_TXNAME2GENEID_MAPDEFS’
  See the note in ?`:::` about the use of this operator.
See the information on DESCRIPTION files in the chapter ‘Creating R
packages’ of the ‘Writing R Extensions’ manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... WARNING
Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/anoCar1.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/anoCar1.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/anoCar1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/anoGam1.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/anoGam1.geneid.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/anoGam1.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/apiMel1.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/apiMel2.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/apiMel2.geneid.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/apiMel2.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/aplCal1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau2.geneid.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau2.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau2.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau2.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau2.sgpGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau3.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau3.geneid.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau3.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau3.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau3.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau3.sgpGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau4.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau4.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau4.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau4.nscanGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/bosTau4.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/braFlo1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/caeJap1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/caePb1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/caePb2.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/caeRem2.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/caeRem3.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/calJac1.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/calJac1.nscanGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/calJac1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam1.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam1.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam1.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam1.nscanGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam1.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam2.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam2.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam2.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam2.nscanGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam2.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/canFam2.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/cavPor3.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/cavPor3.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/cavPor3.nscanGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/cavPor3.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/cb1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/cb3.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce2.geneid.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce2.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce2.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce4.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce4.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce4.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce6.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce6.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce6.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ce6.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ci1.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ci1.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ci1.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ci2.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ci2.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ci2.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ci2.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer3.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer3.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer3.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer4.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer4.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer4.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer4.nscanGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer4.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer5.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer5.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer5.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer5.vegaGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer5.vegaPseudoGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer6.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer6.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer6.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/danRer6.xenoRefGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm1.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm1.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm1.refGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm2.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm2.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm2.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm2.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm3.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm3.nscanPasaGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dm3.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dp2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dp2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dp3.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dp3.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/dp3.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droAna1.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droAna1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droAna1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droAna2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droAna2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droEre1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droEre1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droGri1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droGri1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droMoj1.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droMoj1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droMoj1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droMoj2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droMoj2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droPer1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droPer1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droSec1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droSec1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droSim1.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droSim1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droSim1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droVir1.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droVir1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droVir1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droVir2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droVir2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droYak1.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droYak1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droYak1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droYak2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/droYak2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab1.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab1.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab1.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab1.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab1.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab2.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab2.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab2.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab2.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/equCab2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/felCat3.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/fr1.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/fr1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/fr2.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal2.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal2.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal2.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal2.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal2.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal3.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal3.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal3.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal3.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal3.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/galGal3.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/gasAcu1.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/gasAcu1.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.acembly.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.exoniphy.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg16.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.acembly.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.acescan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.ccdsGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.exoniphy.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.vegaGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.vegaPseudoGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg17.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg18.acembly.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg18.acescan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg18.ccdsGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/hg19.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm7.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm7.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm7.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm7.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.sibGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm8.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.acembly.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.ccdsGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.exoniphy.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/mm9.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom4.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom4.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom4.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom4.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom4.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom5.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom5.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom5.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom5.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom5.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/monDom5.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ornAna1.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/ornAna1.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/oryLat2.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/oryLat2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/panTro1.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn3.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn3.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn3.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.knownGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.sgpGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/rn4.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/sacCer1.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/sacCer2.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur1.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur1.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur2.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur2.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur2.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/strPur2.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/taeGut1.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/taeGut1.geneSymbol.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/taeGut1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/taeGut1.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/taeGut1.refGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/taeGut1.xenoRefGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/tetNig1.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/tetNig1.geneid.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/tetNig1.genscan.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/tetNig1.nscanGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/tetNig2.ensGene.LENGTH.Rd’:
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Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/xenTro1.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/xenTro2.ensGene.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/xenTro2.geneSymbol.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/xenTro2.genscan.LENGTH.Rd’:
  ‘downloadLengthFromUCSC’

Missing link or links in documentation object ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00_pkg_src/geneLenDataBase/man/xenTro2.refGene.LENGTH.Rd’:
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See the information in section ‘Cross-references’ of the ‘Writing R
Extensions’ manual.

* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [115s/116s] OK
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
  ‘/Users/biocbuild/bbs-2.13-data-experiment/meat/geneLenDataBase.Rcheck/00check.log’
for details.

geneLenDataBase.Rcheck/00install.out:

* installing *source* package ‘geneLenDataBase’ ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (geneLenDataBase)

geneLenDataBase.Rcheck/geneLenDataBase-Ex.timings:

nameusersystemelapsed
anoCar1.ensGene.LENGTH0.0890.0070.160
anoCar1.genscan.LENGTH0.0780.0080.087
anoCar1.xenoRefGene.LENGTH1.8100.0251.835
anoGam1.ensGene.LENGTH0.080.010.09
anoGam1.geneid.LENGTH0.0640.0060.070
anoGam1.genscan.LENGTH0.0770.0070.084
apiMel1.genscan.LENGTH0.0600.0050.065
apiMel2.ensGene.LENGTH0.1380.0060.144
apiMel2.geneid.LENGTH0.0770.0060.106
apiMel2.genscan.LENGTH0.0620.0050.067
aplCal1.xenoRefGene.LENGTH0.6120.0170.630
bosTau2.geneSymbol.LENGTH0.0610.0090.069
bosTau2.geneid.LENGTH0.3510.0090.361
bosTau2.genscan.LENGTH0.1630.0070.169
bosTau2.refGene.LENGTH0.0570.0080.064
bosTau2.sgpGene.LENGTH0.1610.0100.172
bosTau3.ensGene.LENGTH0.1430.0060.150
bosTau3.geneSymbol.LENGTH0.0440.0050.050
bosTau3.geneid.LENGTH0.1480.0090.157
bosTau3.genscan.LENGTH0.1300.0080.138
bosTau3.refGene.LENGTH0.0850.0040.090
bosTau3.sgpGene.LENGTH0.1430.0080.152
bosTau4.ensGene.LENGTH0.1460.0060.152
bosTau4.geneSymbol.LENGTH0.0710.0040.075
bosTau4.genscan.LENGTH0.1470.0070.155
bosTau4.nscanGene.LENGTH0.0970.0050.103
bosTau4.refGene.LENGTH0.0960.0050.101
braFlo1.xenoRefGene.LENGTH0.8020.0170.819
caeJap1.xenoRefGene.LENGTH0.5110.0130.524
caePb1.xenoRefGene.LENGTH1.1740.0181.193
caePb2.xenoRefGene.LENGTH0.5750.0140.590
caeRem2.xenoRefGene.LENGTH0.5550.0140.568
caeRem3.xenoRefGene.LENGTH0.4540.0100.463
calJac1.genscan.LENGTH0.1080.0080.116
calJac1.nscanGene.LENGTH0.1420.0090.151
calJac1.xenoRefGene.LENGTH1.3740.0291.404
canFam1.ensGene.LENGTH0.1610.0070.168
canFam1.geneSymbol.LENGTH0.5090.0050.513
canFam1.genscan.LENGTH0.0800.0080.088
canFam1.nscanGene.LENGTH0.0790.0080.165
canFam1.refGene.LENGTH0.0270.0050.032
canFam1.xenoRefGene.LENGTH0.7520.0150.767
canFam2.ensGene.LENGTH0.1460.0090.155
canFam2.geneSymbol.LENGTH0.0360.0040.041
canFam2.genscan.LENGTH0.1110.0080.120
canFam2.nscanGene.LENGTH0.1560.0090.164
canFam2.refGene.LENGTH0.0430.0040.047
canFam2.xenoRefGene.LENGTH1.1320.0141.165
cavPor3.ensGene.LENGTH0.1540.0070.161
cavPor3.genscan.LENGTH0.2420.0100.252
cavPor3.nscanGene.LENGTH0.1270.0120.139
cavPor3.xenoRefGene.LENGTH1.0210.0131.034
cb1.xenoRefGene.LENGTH0.6780.0120.690
cb3.xenoRefGene.LENGTH0.6000.0100.611
ce2.geneSymbol.LENGTH0.1330.0070.141
ce2.geneid.LENGTH0.3170.0110.327
ce2.refGene.LENGTH0.0970.0110.107
ce4.geneSymbol.LENGTH0.1230.0100.132
ce4.refGene.LENGTH0.0960.0080.104
ce4.xenoRefGene.LENGTH0.1230.0080.131
ce6.ensGene.LENGTH0.1380.0090.148
ce6.geneSymbol.LENGTH0.1070.0080.114
ce6.refGene.LENGTH0.1150.0060.122
ce6.xenoRefGene.LENGTH0.1410.0080.150
ci1.geneSymbol.LENGTH0.0380.0030.041
ci1.refGene.LENGTH0.0620.0030.067
ci1.xenoRefGene.LENGTH0.6650.0110.677
ci2.ensGene.LENGTH0.0860.0070.093
ci2.geneSymbol.LENGTH0.0280.0040.032
ci2.refGene.LENGTH0.0280.0030.030
ci2.xenoRefGene.LENGTH0.3350.0110.346
danRer3.ensGene.LENGTH0.1340.0070.142
danRer3.geneSymbol.LENGTH0.0930.0070.113
danRer3.refGene.LENGTH0.0970.0070.103
danRer4.ensGene.LENGTH0.2150.0100.224
danRer4.geneSymbol.LENGTH0.1360.0070.144
danRer4.genscan.LENGTH0.1470.0090.156
danRer4.nscanGene.LENGTH0.6150.0140.629
danRer4.refGene.LENGTH0.0750.0060.081
danRer5.ensGene.LENGTH0.1410.0090.151
danRer5.geneSymbol.LENGTH0.0840.0060.088
danRer5.refGene.LENGTH0.0820.0050.087
danRer5.vegaGene.LENGTH0.0880.0050.094
danRer5.vegaPseudoGene.LENGTH0.0330.0030.037
danRer6.ensGene.LENGTH0.2170.0090.225
danRer6.geneSymbol.LENGTH0.1340.0060.140
danRer6.refGene.LENGTH0.1080.0060.114
danRer6.xenoRefGene.LENGTH1.3640.0151.379
dm1.geneSymbol.LENGTH0.1090.0090.117
dm1.genscan.LENGTH0.0660.0050.072
dm1.refGene.LENGTH0.1160.0070.124
dm2.geneSymbol.LENGTH0.1210.0100.130
dm2.geneid.LENGTH0.0880.0070.094
dm2.genscan.LENGTH0.0710.0060.078
dm2.nscanGene.LENGTH0.1450.0070.153
dm2.refGene.LENGTH0.1100.0070.117
dm3.geneSymbol.LENGTH0.1580.0080.166
dm3.nscanPasaGene.LENGTH0.5260.0080.533
dm3.refGene.LENGTH0.1040.0110.114
dp2.genscan.LENGTH0.0450.0070.051
dp2.xenoRefGene.LENGTH0.2810.0110.292
dp3.geneid.LENGTH0.0760.0070.083
dp3.genscan.LENGTH0.0620.0060.067
dp3.xenoRefGene.LENGTH0.1710.0090.181
droAna1.geneid.LENGTH0.1240.0060.130
droAna1.genscan.LENGTH0.0920.0060.098
droAna1.xenoRefGene.LENGTH0.2540.0090.264
droAna2.genscan.LENGTH0.0980.0070.106
droAna2.xenoRefGene.LENGTH0.3180.0100.327
droEre1.genscan.LENGTH0.0710.0070.078
droEre1.xenoRefGene.LENGTH0.3390.0110.350
droGri1.genscan.LENGTH0.0900.0060.096
droGri1.xenoRefGene.LENGTH0.3420.0120.355
droMoj1.geneid.LENGTH0.2460.0090.255
droMoj1.genscan.LENGTH0.1210.0070.129
droMoj1.xenoRefGene.LENGTH0.220.010.23
droMoj2.genscan.LENGTH0.0630.0060.069
droMoj2.xenoRefGene.LENGTH0.3070.0110.317
droPer1.genscan.LENGTH0.0710.0060.077
droPer1.xenoRefGene.LENGTH0.3570.0110.367
droSec1.genscan.LENGTH0.0680.0070.075
droSec1.xenoRefGene.LENGTH0.3190.0110.331
droSim1.geneid.LENGTH0.0850.0050.091
droSim1.genscan.LENGTH0.0730.0070.081
droSim1.xenoRefGene.LENGTH0.2630.0110.274
droVir1.geneid.LENGTH0.1600.0060.166
droVir1.genscan.LENGTH0.1040.0070.110
droVir1.xenoRefGene.LENGTH0.3130.0120.324
droVir2.genscan.LENGTH0.1040.0080.111
droVir2.xenoRefGene.LENGTH0.3700.0100.381
droYak1.geneid.LENGTH0.0920.0060.099
droYak1.genscan.LENGTH0.0410.0070.049
droYak1.xenoRefGene.LENGTH0.2350.0090.244
droYak2.genscan.LENGTH0.0410.0060.046
droYak2.xenoRefGene.LENGTH0.2820.0100.293
equCab1.geneSymbol.LENGTH0.0600.0040.064
equCab1.geneid.LENGTH0.1460.0080.154
equCab1.nscanGene.LENGTH0.0560.0050.061
equCab1.refGene.LENGTH0.0320.0040.037
equCab1.sgpGene.LENGTH0.1120.0070.120
equCab2.ensGene.LENGTH0.1470.0080.155
equCab2.geneSymbol.LENGTH0.0490.0040.053
equCab2.nscanGene.LENGTH0.1100.0060.116
equCab2.refGene.LENGTH0.0500.0060.055
equCab2.xenoRefGene.LENGTH0.6950.0120.707
felCat3.ensGene.LENGTH0.1120.0090.121
felCat3.geneSymbol.LENGTH0.0190.0050.023
felCat3.geneid.LENGTH1.5500.0181.568
felCat3.genscan.LENGTH0.1310.0090.140
felCat3.nscanGene.LENGTH0.1700.0130.182
felCat3.refGene.LENGTH0.0460.0060.052
felCat3.sgpGene.LENGTH0.2040.0100.424
felCat3.xenoRefGene.LENGTH1.8640.0221.886
fr1.ensGene.LENGTH0.1260.0070.133
fr1.genscan.LENGTH0.1070.0070.114
fr2.ensGene.LENGTH0.1950.0070.203
galGal2.ensGene.LENGTH0.0680.0080.075
galGal2.geneSymbol.LENGTH0.0410.0060.048
galGal2.geneid.LENGTH0.0720.0090.080
galGal2.genscan.LENGTH0.0840.0080.092
galGal2.refGene.LENGTH0.0460.0060.052
galGal2.sgpGene.LENGTH0.0590.0060.065
galGal3.ensGene.LENGTH0.1090.0090.118
galGal3.geneSymbol.LENGTH0.0220.0040.026
galGal3.genscan.LENGTH0.0890.0070.096
galGal3.nscanGene.LENGTH0.1230.0090.132
galGal3.refGene.LENGTH0.0520.0040.057
galGal3.xenoRefGene.LENGTH0.8830.0150.898
gasAcu1.ensGene.LENGTH0.2360.0110.246
gasAcu1.nscanGene.LENGTH0.2190.0080.227
hg16.acembly.LENGTH0.5430.0150.558
hg16.ensGene.LENGTH0.1340.0090.144
hg16.exoniphy.LENGTH0.3620.0130.375
hg16.geneSymbol.LENGTH0.1890.0100.199
hg16.geneid.LENGTH0.1270.0100.138
hg16.genscan.LENGTH0.1340.0100.144
hg16.knownGene.LENGTH0.1910.0090.200
hg16.refGene.LENGTH0.1560.0100.165
hg16.sgpGene.LENGTH0.1250.0070.133
hg17.acembly.LENGTH0.6570.0150.672
hg17.acescan.LENGTH0.0160.0060.021
hg17.ccdsGene.LENGTH0.0320.0050.036
hg17.ensGene.LENGTH0.1090.0070.115
hg17.exoniphy.LENGTH0.4310.0110.442
hg17.geneSymbol.LENGTH0.1110.0080.120
hg17.geneid.LENGTH0.1800.0090.189
hg17.genscan.LENGTH0.1080.0080.116
hg17.knownGene.LENGTH0.1590.0080.168
hg17.refGene.LENGTH0.1080.0070.114
hg17.sgpGene.LENGTH0.1290.0090.138
hg17.vegaGene.LENGTH0.0870.0060.093
hg17.vegaPseudoGene.LENGTH0.0260.0040.030
hg17.xenoRefGene.LENGTH0.2650.0090.274
hg18.acembly.LENGTH0.9030.0150.918
hg18.acescan.LENGTH0.0170.0050.021
hg18.ccdsGene.LENGTH0.0440.0050.049
hg18.ensGene.LENGTH0.1890.0080.197
hg18.exoniphy.LENGTH0.5440.0120.557
hg18.geneSymbol.LENGTH0.1450.0070.153
hg18.geneid.LENGTH0.1770.0080.186
hg18.genscan.LENGTH0.0820.0070.090
hg18.knownGene.LENGTH0.2170.0090.226
hg18.knownGeneOld3.LENGTH0.1340.0080.143
hg18.refGene.LENGTH0.1480.0070.156
hg18.sgpGene.LENGTH0.1410.0070.148
hg18.sibGene.LENGTH0.5860.0110.597
hg18.xenoRefGene.LENGTH0.3980.0110.409
hg19.ccdsGene.LENGTH0.0980.0060.104
hg19.ensGene.LENGTH0.3760.0080.385
hg19.exoniphy.LENGTH1.1430.0161.160
hg19.geneSymbol.LENGTH0.1410.0100.151
hg19.knownGene.LENGTH0.2190.0090.227
hg19.nscanGene.LENGTH0.1720.0070.179
hg19.refGene.LENGTH0.1870.0090.196
hg19.xenoRefGene.LENGTH0.4430.0110.454
loxAfr3.xenoRefGene.LENGTH0.8490.0150.863
mm7.ensGene.LENGTH0.1910.0090.199
mm7.geneSymbol.LENGTH0.1530.0070.160
mm7.geneid.LENGTH0.2350.0070.252
mm7.genscan.LENGTH0.1480.0070.156
mm7.knownGene.LENGTH0.1780.0060.185
mm7.refGene.LENGTH0.2430.0090.251
mm7.sgpGene.LENGTH0.1670.0070.175
mm7.xenoRefGene.LENGTH0.3420.0130.355
mm8.ccdsGene.LENGTH0.0320.0050.037
mm8.ensGene.LENGTH0.1080.0090.117
mm8.geneSymbol.LENGTH0.1250.0090.134
mm8.geneid.LENGTH0.1420.0090.152
mm8.genscan.LENGTH0.1200.0090.131
mm8.knownGene.LENGTH0.5320.0090.542
mm8.nscanGene.LENGTH0.0950.0070.103
mm8.refGene.LENGTH0.1120.0110.124
mm8.sgpGene.LENGTH0.0990.0080.108
mm8.sibGene.LENGTH0.3370.0100.347
mm8.xenoRefGene.LENGTH0.5050.0100.516
mm9.acembly.LENGTH0.4880.0120.501
mm9.ccdsGene.LENGTH0.0940.0050.101
mm9.ensGene.LENGTH0.2410.0080.248
mm9.exoniphy.LENGTH0.7630.0130.776
mm9.geneSymbol.LENGTH0.1700.0070.177
mm9.geneid.LENGTH0.2620.0090.272
mm9.genscan.LENGTH0.9450.0160.961
mm9.knownGene.LENGTH0.1430.0070.150
mm9.nscanGene.LENGTH0.1040.0100.114
mm9.refGene.LENGTH0.1250.0100.134
mm9.sgpGene.LENGTH0.1080.0090.117
mm9.xenoRefGene.LENGTH0.5500.0150.566
monDom1.genscan.LENGTH0.1180.0090.127
monDom4.ensGene.LENGTH0.1310.0090.141
monDom4.geneSymbol.LENGTH0.0520.0040.056
monDom4.genscan.LENGTH0.1150.0080.122
monDom4.nscanGene.LENGTH0.1290.0090.139
monDom4.refGene.LENGTH0.1160.0040.121
monDom4.xenoRefGene.LENGTH0.4530.0120.466
monDom5.ensGene.LENGTH0.2440.0110.256
monDom5.geneSymbol.LENGTH0.0950.0040.099
monDom5.genscan.LENGTH0.1260.0070.133
monDom5.nscanGene.LENGTH0.2010.0070.209
monDom5.refGene.LENGTH0.0960.0050.100
monDom5.xenoRefGene.LENGTH0.7780.0130.792
ornAna1.ensGene.LENGTH0.1750.0070.182
ornAna1.geneSymbol.LENGTH0.0080.0030.011
ornAna1.refGene.LENGTH0.0200.0040.025
ornAna1.xenoRefGene.LENGTH0.5600.0140.573
oryLat2.ensGene.LENGTH0.0860.0070.093
oryLat2.geneSymbol.LENGTH0.0100.0040.014
oryLat2.refGene.LENGTH0.0480.0050.053
oryLat2.xenoRefGene.LENGTH0.5550.0140.568
panTro1.ensGene.LENGTH0.1230.0080.131
panTro1.geneid.LENGTH0.1100.0060.116
panTro1.genscan.LENGTH0.1380.0080.145
panTro1.xenoRefGene.LENGTH0.1820.0090.191
panTro2.ensGene.LENGTH0.1980.0070.205
panTro2.geneSymbol.LENGTH0.1770.0090.187
panTro2.genscan.LENGTH0.1400.0080.147
panTro2.nscanGene.LENGTH0.1440.0080.151
panTro2.refGene.LENGTH0.2080.0080.216
panTro2.xenoRefGene.LENGTH0.6120.0110.623
petMar1.xenoRefGene.LENGTH0.2560.0090.265
ponAbe2.ensGene.LENGTH0.1010.0080.109
ponAbe2.geneSymbol.LENGTH0.0220.0050.027
ponAbe2.genscan.LENGTH0.0810.0080.091
ponAbe2.nscanGene.LENGTH0.1100.0090.119
ponAbe2.refGene.LENGTH0.0490.0040.053
ponAbe2.xenoRefGene.LENGTH0.7370.0140.751
priPac1.xenoRefGene.LENGTH0.4390.0130.451
rheMac2.ensGene.LENGTH0.1880.0080.196
rheMac2.geneSymbol.LENGTH0.1130.0040.117
rheMac2.geneid.LENGTH0.0950.0070.103
rheMac2.nscanGene.LENGTH0.0770.0070.083
rheMac2.refGene.LENGTH0.0110.0030.015
rheMac2.sgpGene.LENGTH0.0920.0080.099
rheMac2.xenoRefGene.LENGTH0.5660.0160.582
rn3.ensGene.LENGTH0.1520.0070.160
rn3.geneSymbol.LENGTH0.1170.0070.124
rn3.geneid.LENGTH0.1850.0080.193
rn3.genscan.LENGTH0.1280.0090.137
rn3.knownGene.LENGTH0.0350.0050.041
rn3.nscanGene.LENGTH0.1230.0070.129
rn3.refGene.LENGTH0.0610.0050.067
rn3.sgpGene.LENGTH0.1370.0080.146
rn3.xenoRefGene.LENGTH0.6560.0160.673
rn4.ensGene.LENGTH0.2690.0110.278
rn4.geneSymbol.LENGTH0.5630.0110.573
rn4.geneid.LENGTH0.1420.0090.151
rn4.genscan.LENGTH0.1030.0110.113
rn4.knownGene.LENGTH0.0590.0070.067
rn4.nscanGene.LENGTH0.1000.0080.109
rn4.refGene.LENGTH0.0580.0060.064
rn4.sgpGene.LENGTH0.1030.0080.111
rn4.xenoRefGene.LENGTH0.3540.0110.365
sacCer1.ensGene.LENGTH0.0720.0050.077
sacCer2.ensGene.LENGTH0.0680.0040.072
strPur1.geneSymbol.LENGTH0.0550.0030.059
strPur1.genscan.LENGTH0.1270.0090.136
strPur1.refGene.LENGTH0.4580.0050.464
strPur1.xenoRefGene.LENGTH0.6450.0160.661
strPur2.geneSymbol.LENGTH0.0110.0050.015
strPur2.genscan.LENGTH0.1190.0100.129
strPur2.refGene.LENGTH0.0090.0040.013
strPur2.xenoRefGene.LENGTH0.9320.0170.950
supportedGeneIDs0.0250.0050.036
supportedGenomes0.1910.0100.421
taeGut1.ensGene.LENGTH0.1170.0080.126
taeGut1.geneSymbol.LENGTH0.0490.0030.053
taeGut1.genscan.LENGTH0.0910.0060.097
taeGut1.nscanGene.LENGTH0.0920.0060.098
taeGut1.refGene.LENGTH0.0750.0040.079
taeGut1.xenoRefGene.LENGTH0.4900.0120.503
tetNig1.ensGene.LENGTH0.1690.0080.176
tetNig1.geneid.LENGTH0.1480.0080.157
tetNig1.genscan.LENGTH0.1220.0070.129
tetNig1.nscanGene.LENGTH0.1800.0070.188
tetNig2.ensGene.LENGTH0.1450.0070.152
unfactor0.1400.0070.147
xenTro1.genscan.LENGTH0.1760.0080.185
xenTro2.ensGene.LENGTH0.2440.0110.256
xenTro2.geneSymbol.LENGTH0.0390.0050.045
xenTro2.genscan.LENGTH0.0880.0070.094
xenTro2.refGene.LENGTH0.0370.0040.042