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BioC 2.12: BUILD BIN report for DNAcopy on moscato2

This page was generated on 2013-10-09 09:38:08 -0700 (Wed, 09 Oct 2013).

Package 185/671HostnameOS / ArchBUILDCHECKBUILD BIN
DNAcopy 1.34.0
Venkatraman E. Seshan
Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/DNAcopy
Last Changed Rev: 75263 / Revision: 81334
Last Changed Date: 2013-04-03 14:32:27 -0700 (Wed, 03 Apr 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 

Summary

Package: DNAcopy
Version: 1.34.0
Command: rm -rf DNAcopy.buildbin-libdir && mkdir DNAcopy.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=DNAcopy.buildbin-libdir DNAcopy_1.34.0.tar.gz
StartedAt: 2013-10-09 05:03:06 -0700 (Wed, 09 Oct 2013)
EndedAt: 2013-10-09 05:03:36 -0700 (Wed, 09 Oct 2013)
EllapsedTime: 29.7 seconds
RetCode: 0
Status:  OK  
PackageFile: DNAcopy_1.34.0.zip
PackageFileSize: 600.5 KiB

Command output


install for i386

* installing *source* package 'DNAcopy' ...
** libs
gfortran -m32     -O3  -mtune=core2 -c cbsWtstats.f -o cbsWtstats.o
gfortran -m32     -O3  -mtune=core2 -c cbststats.f -o cbststats.o
gfortran -m32     -O3  -mtune=core2 -c changepoints-wtd.f -o changepoints-wtd.o
gfortran -m32     -O3  -mtune=core2 -c changepoints.f -o changepoints.o
gfortran -m32     -O3  -mtune=core2 -c esegment.f -o esegment.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c flchoose.c -o flchoose.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c fphyper.c -o fphyper.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c fpnorm.c -o fpnorm.o
gfortran -m32     -O3  -mtune=core2 -c getbdry.f -o getbdry.o
gfortran -m32     -O3  -mtune=core2 -c prune.f -o prune.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c rshared.c -o rshared.o
gfortran -m32     -O3  -mtune=core2 -c segmentp.f -o segmentp.o
gfortran -m32     -O3  -mtune=core2 -c smoothCNA.f -o smoothCNA.o
gfortran -m32     -O3  -mtune=core2 -c tailprobs.f -o tailprobs.o
gcc -m32 -shared -s -static-libgcc -o DNAcopy.dll tmp.def cbsWtstats.o cbststats.o changepoints-wtd.o changepoints.o esegment.o flchoose.o fphyper.o fpnorm.o getbdry.o prune.o rshared.o segmentp.o smoothCNA.o tailprobs.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -lgfortran -LE:/biocbld/BBS-2˜1.12-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/DNAcopy.buildbin-libdir/DNAcopy/libs/i386
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'DNAcopy' ...
** libs
gfortran -m64     -O2  -mtune=core2 -c cbsWtstats.f -o cbsWtstats.o
gfortran -m64     -O2  -mtune=core2 -c cbststats.f -o cbststats.o
gfortran -m64     -O2  -mtune=core2 -c changepoints-wtd.f -o changepoints-wtd.o
gfortran -m64     -O2  -mtune=core2 -c changepoints.f -o changepoints.o
gfortran -m64     -O2  -mtune=core2 -c esegment.f -o esegment.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c flchoose.c -o flchoose.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c fphyper.c -o fphyper.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c fpnorm.c -o fpnorm.o
gfortran -m64     -O2  -mtune=core2 -c getbdry.f -o getbdry.o
gfortran -m64     -O2  -mtune=core2 -c prune.f -o prune.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c rshared.c -o rshared.o
gfortran -m64     -O2  -mtune=core2 -c segmentp.f -o segmentp.o
gfortran -m64     -O2  -mtune=core2 -c smoothCNA.f -o smoothCNA.o
gfortran -m64     -O2  -mtune=core2 -c tailprobs.f -o tailprobs.o
gcc -m64 -shared -s -static-libgcc -o DNAcopy.dll tmp.def cbsWtstats.o cbststats.o changepoints-wtd.o changepoints.o esegment.o flchoose.o fphyper.o fpnorm.o getbdry.o prune.o rshared.o segmentp.o smoothCNA.o tailprobs.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -lgfortran -LE:/biocbld/BBS-2˜1.12-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/DNAcopy.buildbin-libdir/DNAcopy/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DNAcopy' as DNAcopy_1.34.0.zip
* DONE (DNAcopy)