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Package 228/233HostnameOS / ArchBUILDCHECKBUILD BIN
vsn 3.2.1
Wolfgang Huber
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
Last Changed Rev: 27722 / Revision: 30966
Last Changed Date: 2007-10-03 05:46:44 -0700 (Wed, 03 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
Package: vsn
Version: 3.2.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build vsn
StartedAt: 2008-04-09 14:00:48 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 14:02:09 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 81.0 seconds
RetCode: 0
Status: OK
PackageFile: vsn_3.2.1.tar.gz
PackageFileSize: 1.732 MiB

Command output

* checking for file 'vsn/DESCRIPTION' ... OK
* preparing 'vsn':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'vsn' ...
** libs
** arch - i386
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386  -msse3    -fPIC  -g -O2 -march=nocona -c init.c -o init.o
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386  -msse3    -fPIC  -g -O2 -march=nocona -c vsn.c -o vsn.o
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386  -msse3    -fPIC  -g -O2 -march=nocona -c vsn2.c -o vsn2.o
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -Wl,-macosx_version_min -Wl,10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o init.o vsn.o vsn2.o   -F/Library/Frameworks/R.framework/.. -framework R 
** arch - ppc
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c init.c -o init.o
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c vsn.c -o vsn.o
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c vsn2.c -o vsn2.o
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -Wl,-macosx_version_min -Wl,10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o init.o vsn.o vsn2.o   -F/Library/Frameworks/R.framework/.. -framework R 
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: limma
Creating a new generic function for "logLik" in "vsn"
Creating a new generic function for "coef" in "vsn"
Creating a new generic function for "coefficients" in "vsn"
** help
 >>> Building/Updating help pages for package 'vsn'
     Formats: text html latex example 
  class.vsn                         text    html    latex   example
  class.vsnInput                    text    html    latex   example
  getIntensityMatrix                text    html    latex   example
  justvsn                           text    html    latex   example
  kidney                            text    html    latex   example
  lymphoma                          text    html    latex   example
  meanSdPlot                        text    html    latex   example
  normalize.AffyBatch.vsn           text    html    latex   example
  sagmbSimulateData                 text    html    latex   example
  scalingFactorTransformation       text    html    latex   example
  vsn-package                       text    html    latex
  vsn                               text    html    latex   example
  vsn2                              text    html    latex   example
  vsn2trsf                          text    html    latex   example
  vsnLikelihood                     text    html    latex   example
  vsnPlotPar                        text    html    latex   example
  vsnh                              text    html    latex   example
** building package indices ...
* DONE (vsn)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory 'vsn/tests' is empty
* building 'vsn_3.2.1.tar.gz'