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affypdnn

1.8.1

Laurent
Last Changed Date: 2006-12-02 00:51:55 -0800
Last Changed Rev: 21332
lamb1 Linux (SUSE 10.1) x86_64  OK  OK 
wellington Linux (SUSE 9.2) i686  OK  OK 
churchill Solaris 2.9 sparc  OK  OK 
lemming Windows Server 2003 x86_64  OK [ OK ] OK 
Package: affypdnn
Version: 1.8.1
Command: D:\biocbld\bbs-1.9\R\bin\R.exe CMD check affypdnn_1.8.1.tar.gz
RetCode: 0
Time: 669.3 seconds
Status: OK
CheckDir: affypdnn.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/bbs-1.9/meat/affypdnn.Rcheck'
* using R version 2.4.1 (2006-12-18)
* checking for file 'affypdnn/DESCRIPTION' ... OK
* this is package 'affypdnn' version '1.8.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'affypdnn' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating affypdnn-Ex.R ... OK
* checking examples ... OK
* creating affypdnn-manual.tex ... OK
* checking affypdnn-manual.tex ... OK

affypdnn.Rcheck/00install.out:

installing R.css in D:/biocbld/bbs-1.9/meat/affypdnn.Rcheck


---------- Making package affypdnn ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'affypdnn'
     Formats: text html latex example chm 
  chiptype.pdnn.params              text    html    latex   example chm
  expressopdnn                      text    html    latex   example chm
  find.params.pdnn                  text    html    latex   example chm
  generateExprVal.method.pdnn       text    html    latex   example chm
  matplotProbesPDNN                 text    html    latex   example chm
  pdnn.params.chiptype              text    html    latex   example chm
  transform.ProbeSet                text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\bbs-1.9\meat\affypdnn.Rcheck\00_pkg_src\affypdnn\chm\affypdnn.chm


Compile time: 0 minutes, 0 seconds
8	Topics
31	Local links
0	Internet links
1	Graphic


Created d:\biocbld\bbs-1.9\meat\affypdnn.Rcheck\00_pkg_src\affypdnn\chm\affypdnn.chm, 27,711 bytes
Compression decreased file by 7,632 bytes.
  preparing package affypdnn for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: affyio
Loading required package: affydata
Loading required package: hgu95av2probe
Loading required package: matchprobes
  adding MD5 sums

* DONE (affypdnn)