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curatedOvarianData

Clinically Annotated Data for the Ovarian Cancer Transcriptome


Bioconductor version: Release (3.18)

The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer.

Author: Benjamin F. Ganzfried, Markus Riester, Steve Skates, Victoria Wang, Thomas Risch, Benjamin Haibe-Kains, Svitlana Tyekucheva, Jie Ding, Ina Jazic, Michael Birrer, Giovanni Parmigiani, Curtis Huttenhower, Levi Waldron

Maintainer: Levi Waldron <lwaldron.research at gmail.com>

Citation (from within R, enter citation("curatedOvarianData")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("curatedOvarianData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("curatedOvarianData")
curatedOvarianData_vignette.pdf PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews CancerData, ExperimentData, MicroarrayData, OvarianCancerData, RNASeqData
Version 1.40.1
License Artistic-2.0
Depends R (>= 3.0.0), Biobase
Imports BiocGenerics
System Requirements
URL http://bcb.dfci.harvard.edu/ovariancancer
See More
Suggests survival, RUnit, metafor, genefilter, logging, sva, xtable, futile.logger, BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me doppelgangR, TOP
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package curatedOvarianData_1.40.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/curatedOvarianData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/curatedOvarianData
Package Short Url https://bioconductor.org/packages/curatedOvarianData/
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