survcomp
Performance Assessment and Comparison for Survival Analysis
Bioconductor version: Release (3.19)
Assessment and Comparison for Performance of Risk Prediction (Survival) Models.
Author: Benjamin Haibe-Kains [aut, cre], Markus Schroeder [aut], Catharina Olsen [aut], Christos Sotiriou [aut], Gianluca Bontempi [aut], John Quackenbush [aut], Samuel Branders [aut], Zhaleh Safikhani [aut]
Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>
citation("survcomp")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("survcomp")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("survcomp")
SurvComp: a package for performance assessment and comparison for survival analysis | R Script | |
Reference Manual |
Details
biocViews | DifferentialExpression, GeneExpression, Software, Visualization |
Version | 1.54.0 |
In Bioconductor since | BioC 2.8 (R-2.13) (13.5 years) |
License | Artistic-2.0 |
Depends | survival, prodlim, R (>= 3.4) |
Imports | ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid, rmeta, stats, graphics |
System Requirements | |
URL | http://www.pmgenomics.ca/bhklab/ |
See More
Suggests | Hmisc, clinfun, xtable, Biobase, BiocManager |
Linking To | |
Enhances | |
Depends On Me | genefu |
Imports Me | metaseqR2, PDATK, Coxmos, FLORAL, pencal, plsRcox, SIGN |
Suggests Me | GSgalgoR, breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | survcomp_1.54.0.tar.gz |
Windows Binary | survcomp_1.54.0.zip (64-bit only) |
macOS Binary (x86_64) | survcomp_1.54.0.tgz |
macOS Binary (arm64) | survcomp_1.54.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/survcomp |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/survcomp |
Bioc Package Browser | https://code.bioconductor.org/browse/survcomp/ |
Package Short Url | https://bioconductor.org/packages/survcomp/ |
Package Downloads Report | Download Stats |