SigFuge
SigFuge
Bioconductor version: Release (3.19)
Algorithm for testing significance of clustering in RNA-seq data.
Author: Patrick Kimes, Christopher Cabanski
Maintainer: Patrick Kimes <patrick.kimes at gmail.com>
Citation (from within R, enter
citation("SigFuge")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SigFuge")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SigFuge")
SigFuge Tutorial | R Script | |
Reference Manual |
Details
biocViews | Clustering, ImmunoOncology, RNASeq, Software, Visualization |
Version | 1.42.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (11 years) |
License | GPL-3 |
Depends | R (>= 3.5.0), GenomicRanges |
Imports | ggplot2, matlab, reshape, sigclust |
System Requirements | |
URL |
See More
Suggests | org.Hs.eg.db, prebsdata, Rsamtools(>= 1.17.0), TxDb.Hsapiens.UCSC.hg19.knownGene, BiocStyle |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | SigFuge_1.42.0.tar.gz |
Windows Binary | SigFuge_1.42.0.zip |
macOS Binary (x86_64) | SigFuge_1.42.0.tgz |
macOS Binary (arm64) | SigFuge_1.42.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/SigFuge |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SigFuge |
Bioc Package Browser | https://code.bioconductor.org/browse/SigFuge/ |
Package Short Url | https://bioconductor.org/packages/SigFuge/ |
Package Downloads Report | Download Stats |