Welcome to the new bioconductor.org!

IdeoViz

Plots data (continuous/discrete) along chromosomal ideogram


Bioconductor version: Release (3.18)

Plots data associated with arbitrary genomic intervals along chromosomal ideogram.

Author: Shraddha Pai <shraddha.pai at utoronto.ca>, Jingliang Ren

Maintainer: Shraddha Pai <shraddha.pai at utoronto.ca>

Citation (from within R, enter citation("IdeoViz")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IdeoViz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IdeoViz")
IdeoViz: a package for plotting simple data along ideograms PDF R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews Microarray, Software, Visualization
Version 1.37.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License GPL-2
Depends R (>= 3.5.0), Biobase, IRanges, GenomicRanges, RColorBrewer, rtracklayer, graphics, GenomeInfoDb
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package IdeoViz_1.37.0.tar.gz
Windows Binary IdeoViz_1.37.0.zip
macOS Binary (x86_64) IdeoViz_1.37.0.tgz
macOS Binary (arm64) IdeoViz_1.37.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/IdeoViz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/IdeoViz
Bioc Package Browser https://code.bioconductor.org/browse/IdeoViz/
Package Short Url https://bioconductor.org/packages/IdeoViz/
Package Downloads Report Download Stats