BiocHubsShiny
View AnnotationHub and ExperimentHub Resources Interactively
Bioconductor version: Release (3.19)
A package that allows interactive exploration of AnnotationHub and ExperimentHub resources. It uses DT / DataTable to display resources for multiple organisms. It provides template code for reproducibility and for downloading resources via the indicated Hub package.
Author: Marcel Ramos [aut, cre] , Vincent Carey [ctb]
Maintainer: Marcel Ramos <marcel.ramos at roswellpark.org>
citation("BiocHubsShiny")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BiocHubsShiny")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocHubsShiny")
BiocHubsShiny Overview | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | ShinyApps, Software |
Version | 1.4.0 |
In Bioconductor since | BioC 3.17 (R-4.3) (1.5 years) |
License | Artistic-2.0 |
Depends | R (>= 4.3.0), shiny |
Imports | AnnotationHub, ExperimentHub, DT, htmlwidgets, S4Vectors, shinyAce, shinyjs, shinythemes, shinytoastr, utils |
System Requirements | |
URL | https://github.com/Bioconductor/BiocHubsShiny |
Bug Reports | https://github.com/Bioconductor/BiocHubsShiny/issues |
See More
Suggests | BiocManager, BiocStyle, knitr, rmarkdown, sessioninfo, shinytest2 |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | BiocHubsShiny_1.4.0.tar.gz |
Windows Binary | BiocHubsShiny_1.4.0.zip |
macOS Binary (x86_64) | BiocHubsShiny_1.4.0.tgz |
macOS Binary (arm64) | BiocHubsShiny_1.4.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/BiocHubsShiny |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocHubsShiny |
Bioc Package Browser | https://code.bioconductor.org/browse/BiocHubsShiny/ |
Package Short Url | https://bioconductor.org/packages/BiocHubsShiny/ |
Package Downloads Report | Download Stats |