This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment

Bioconductor version: Release (3.19)

miRmine database is a collection of expression profiles from different publicly available miRNA-seq datasets, Panwar et al (2017) miRmine: A Database of Human miRNA Expression, prepared with this data package as RangedSummarizedExperiment.

Author: Dusan Randjelovic [aut, cre]

Maintainer: Dusan Randjelovic <dusan.randjelovic at sbgenomics.com>

Citation (from within R, enter citation("miRmine")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews ExpressionData, Homo_sapiens_Data, RNASeqData, SequencingData, Software
Version 1.26.0
In Bioconductor since BioC 3.6 (R-3.4) (6.5 years)
License GPL (>= 3)
Depends R (>= 3.5.0), SummarizedExperiment
System Requirements
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Suggests BiocStyle, knitr, rmarkdown, DESeq2
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Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary miRmine_1.26.0.zip
macOS Binary (x86_64) miRmine_1.26.0.tgz
macOS Binary (arm64) miRmine_1.26.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/miRmine
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/miRmine
Package Short Url https://bioconductor.org/packages/miRmine/
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