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maigesPack

This is the development version of maigesPack; for the stable release version, see maigesPack.

Functions to handle cDNA microarray data, including several methods of data analysis


Bioconductor version: Development (3.19)

This package uses functions of various other packages together with other functions in a coordinated way to handle and analyse cDNA microarray data

Author: Gustavo H. Esteves <gesteves at gmail.com>, with contributions from Roberto Hirata Jr <hirata at ime.usp.br>, E. Jordao Neves <neves at ime.usp.br>, Elier B. Cristo <elier at ime.usp.br>, Ana C. Simoes <anakqui at ime.usp.br> and Lucas Fahham <fahham at linux.ime.usp.br>

Maintainer: Gustavo H. Esteves <gesteves at gmail.com>

Citation (from within R, enter citation("maigesPack")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("maigesPack")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maigesPack")
maigesPack Tutorial PDF R Script
Reference Manual PDF

Details

biocViews Classification, Clustering, DifferentialExpression, GraphAndNetwork, Microarray, Preprocessing, Software, ThirdPartyClient, TwoChannel
Version 1.67.0
In Bioconductor since BioC 2.1 (R-2.6) (16.5 years)
License GPL (>= 2)
Depends R (>= 2.10), convert, graph, limma, marray, methods
Imports
System Requirements
URL http://www.maiges.org/en/software/
See More
Suggests amap, annotate, class, e1071, MASS, multtest, OLIN, R2HTML, rgl, som
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package maigesPack_1.67.0.tar.gz
Windows Binary maigesPack_1.67.1.zip
macOS Binary (x86_64) maigesPack_1.67.1.tgz
macOS Binary (arm64) maigesPack_1.67.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/maigesPack
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/maigesPack
Bioc Package Browser https://code.bioconductor.org/browse/maigesPack/
Package Short Url https://bioconductor.org/packages/maigesPack/
Package Downloads Report Download Stats