Rdisop

DOI: 10.18129/B9.bioc.Rdisop    

Decomposition of Isotopic Patterns

Bioconductor version: Release (3.12)

Identification of metabolites using high precision mass spectrometry. MS Peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.

Author: Anton Pervukhin <apervukh at minet.uni-jena.de>, Steffen Neumann <sneumann at ipb-halle.de>

Maintainer: Steffen Neumann <sneumann at ipb-halle.de>

Citation (from within R, enter citation("Rdisop")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rdisop")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rdisop")

 

PDF Molecule Identification with Rdisop
PDF   Reference Manual
Text   INSTALL

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.50.0
In Bioconductor since BioC 2.2 (R-2.7) (13 years)
License GPL-2
Depends R (>= 2.0.0), Rcpp
Imports
LinkingTo Rcpp
Suggests RUnit
SystemRequirements None
Enhances
URL https://github.com/sneumann/Rdisop
BugReports https://github.com/sneumann/Rdisop/issues/new
Depends On Me
Imports Me enviGCMS, HiResTEC, InterpretMSSpectrum, MetaDBparse
Suggests Me adductomicsR, MSnbase, RforProteomics
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rdisop_1.50.0.tar.gz
Windows Binary Rdisop_1.50.0.zip (32- & 64-bit)
macOS 10.13 (High Sierra) Rdisop_1.50.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rdisop
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rdisop
Package Short Url https://bioconductor.org/packages/Rdisop/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: