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This page was generated on 2021-09-17 15:06:18 -0400 (Fri, 17 Sep 2021).

INSTALL results for psygenet2r on tokay2

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raw results

Package 1456/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
psygenet2r 1.24.0  (landing page)
Alba Gutierrez-Sacristan
Snapshot Date: 2021-09-16 04:50:11 -0400 (Thu, 16 Sep 2021)
git_url: https://git.bioconductor.org/packages/psygenet2r
git_branch: RELEASE_3_13
git_last_commit: 7a013f8
git_last_commit_date: 2021-05-19 12:18:38 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: psygenet2r
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/psygenet2r_1.24.0.tar.gz && rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL psygenet2r_1.24.0.zip && rm psygenet2r_1.24.0.tar.gz psygenet2r_1.24.0.zip
StartedAt: 2021-09-16 09:54:03 -0400 (Thu, 16 Sep 2021)
EndedAt: 2021-09-16 09:54:56 -0400 (Thu, 16 Sep 2021)
EllapsedTime: 52.7 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/psygenet2r_1.24.0.tar.gz && rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL psygenet2r_1.24.0.zip && rm psygenet2r_1.24.0.tar.gz psygenet2r_1.24.0.zip
###
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install for i386

* installing *source* package 'psygenet2r' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'psygenet2r'
    finding HTML links ... done
    DataGeNET.Psy-class                     html  
    JaccardIndexPsy-class                   html  
    enrichedPD-methods                      html  
    extract                                 html  
    extractSentences                        html  
    geneAttrPlot-methods                    html  
    getUMLs-methods                         html  
    jaccardEstimation-methods               html  
    ndisease                                html  
    ngene                                   html  
    pantherGraphic-methods                  html  
    plot-DataGeNET.Psy-ANY-method           html  
    plot-JaccardIndexPsy-ANY-method         html  
    psygenet2r                              html  
    psygenetDisease-methods                 html  
    psygenetDiseaseSentences                html  
    psygenetGene-methods                    html  
    psygenetGeneSentences                   html  
    qr                                      html  
    topAnatEnrichment-methods               html  
    universe                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'psygenet2r' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'psygenet2r' as psygenet2r_1.24.0.zip
* DONE (psygenet2r)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'psygenet2r' successfully unpacked and MD5 sums checked