Back to Multiple platform build/check report for BioC 3.13
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This page was generated on 2021-07-30 15:06:25 -0400 (Fri, 30 Jul 2021).

BUILD BIN results for graph on machv2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graph.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 805/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graph 1.70.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2021-07-29 04:50:02 -0400 (Thu, 29 Jul 2021)
URL: https://git.bioconductor.org/packages/graph
Branch: RELEASE_3_13
Last Commit: 1c28350
Last Changed Date: 2021-05-19 11:33:03 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: graph
Version: 1.70.0
Command: rm -rf graph.buildbin-libdir && mkdir graph.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh graph_1.70.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R graph.buildbin-libdir
StartedAt: 2021-07-30 02:08:43 -0400 (Fri, 30 Jul 2021)
EndedAt: 2021-07-30 02:09:24 -0400 (Fri, 30 Jul 2021)
EllapsedTime: 41.7 seconds
RetCode: 0
Status:   OK  
PackageFile: graph_1.70.0.tgz
PackageFileSize: 1.552 MiB

Command output

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### Running command:
###
###   rm -rf graph.buildbin-libdir && mkdir graph.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh graph_1.70.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R graph.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=graph.buildbin-libdir graph_1.70.0.tar.gz'
>>>>>>> 

* installing *source* package ‘graph’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c graph.c -o graph.o
clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o graph.so graph.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
mv graph.so BioC_graph.so
installing to /Users/biocbuild/bbs-3.13-bioc/meat/graph.buildbin-libdir/00LOCK-graph/00new/graph/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graph)


>>>>>>> 
>>>>>>> FIXING LINKS FOR graph.buildbin-libdir/graph/libs/BioC_graph.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgcc_s.1.dylib" "graph.buildbin-libdir/graph/libs/BioC_graph.so"
install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libgfortran.5.dylib" "graph.buildbin-libdir/graph/libs/BioC_graph.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libquadmath.0.dylib" "graph.buildbin-libdir/graph/libs/BioC_graph.so"