Back to Multiple platform build/check report for BioC 3.19:   simplified   long
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This page was generated on 2024-06-18 17:57 -0400 (Tue, 18 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4758
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4492
merida1macOS 12.7.4 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4464
kjohnson1macOS 13.6.6 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4464
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 705/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fastreeR 1.8.0  (landing page)
Anestis Gkanogiannis
Snapshot Date: 2024-06-16 14:00 -0400 (Sun, 16 Jun 2024)
git_url: https://git.bioconductor.org/packages/fastreeR
git_branch: RELEASE_3_19
git_last_commit: 6d4fbfb
git_last_commit_date: 2024-04-30 11:41:06 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published


CHECK results for fastreeR on nebbiolo1

To the developers/maintainers of the fastreeR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/fastreeR.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: fastreeR
Version: 1.8.0
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:fastreeR.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings fastreeR_1.8.0.tar.gz
StartedAt: 2024-06-16 23:09:28 -0400 (Sun, 16 Jun 2024)
EndedAt: 2024-06-16 23:10:38 -0400 (Sun, 16 Jun 2024)
EllapsedTime: 70.2 seconds
RetCode: 0
Status:   OK  
CheckDir: fastreeR.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:fastreeR.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings fastreeR_1.8.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/fastreeR.Rcheck’
* using R version 4.4.0 (2024-04-24)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
    GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘fastreeR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘fastreeR’ version ‘1.8.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘fastreeR’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘spelling.R’
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: OK


Installation output

fastreeR.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL fastreeR
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘fastreeR’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fastreeR)

Tests output

fastreeR.Rcheck/tests/spelling.Rout


R version 4.4.0 (2024-04-24) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> if(requireNamespace('spelling', quietly = TRUE))
+     spelling::spell_check_test(vignettes = TRUE, error = FALSE,
+                                                         skip_on_cran = TRUE)
NULL
> 
> proc.time()
   user  system elapsed 
  0.166   0.017   0.173 

fastreeR.Rcheck/tests/testthat.Rout


R version 4.4.0 (2024-04-24) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(fastreeR)
> 
> test_check("fastreeR")
VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:51 VCFManager: START READ
16777216
2024/06/16 23:09:51 VCFManager: END READ

Processed variants : 	       4
VCF2TREE : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:52 VCFManager: START READ
2024/06/16 23:09:52 VCFManager: END READ

Processed variants : 	       4
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
3 4
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:52 Clusters=2

S2	0	1
S1	1	2
S3	1	2



3 4
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:52 Clusters=2

S2	0	1
S1	1	2
S3	1	2



3 4
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:52 Clusters=2

S2	0	1
S1	1	2
S3	1	2



3 4
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:52 Clusters=2

S2	0	1
S1	1	2
S3	1	2



100 1000
2024/06/16 23:09:52 Distances=100x100
hierarchical method=Complete
 ..cutHeight not given, setting it to 0.0794  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:52 Clusters=36

HG00126	1	5
HG00149	1	5
HG00182	1	5
HG00233	1	5
HG00262	1	5
HG00100	2	5
HG00101	2	5
HG00106	2	5
HG00107	2	5
HG00125	2	5
HG00096	3	5
HG00128	3	5
HG00154	3	5
HG00173	3	5
HG00242	3	5
HG00108	4	4
HG00129	4	4
HG00232	4	4
HG00253	4	4
HG00110	5	4
HG00121	5	4
HG00123	5	4
HG00256	5	4
HG00185	6	4
HG00189	6	4
HG00258	6	4
HG00261	6	4
HG00114	7	3
HG00133	7	3
HG00234	7	3
HG00120	8	3
HG00136	8	3
HG00236	8	3
HG00141	9	3
HG00187	9	3
HG00254	9	3
HG00142	10	3
HG00146	10	3
HG00160	10	3
HG00118	11	3
HG00138	11	3
HG00157	11	3
HG00158	12	3
HG00177	12	3
HG00178	12	3
HG00115	13	3
HG00130	13	3
HG00155	13	3
HG00111	14	3
HG00137	14	3
HG00150	14	3
HG00112	15	3
HG00132	15	3
HG00148	15	3
HG00140	16	3
HG00151	16	3
HG00237	16	3
HG00231	17	3
HG00238	17	3
HG00243	17	3
HG00180	18	3
HG00252	18	3
HG00260	18	3
HG00116	19	3
HG00122	19	3
HG00139	19	3
HG00097	20	2
HG00102	20	2
HG00145	21	2
HG00244	21	2
HG00113	22	2
HG00259	22	2
HG00099	23	2
HG00174	23	2
HG00171	24	2
HG00255	24	2
HG00176	25	2
HG00235	25	2
HG00179	26	2
HG00250	26	2
HG00103	27	2
HG00257	27	2
HG00188	28	2
HG00245	28	2
HG00127	29	2
HG00186	29	2
HG00105	30	2
HG00183	30	2
HG00119	31	2
HG00190	31	2
HG00131	32	2
HG00159	32	2
HG00109	33	2
HG00246	33	2
HG00117	34	2
HG00240	34	2
HG00143	35	2
HG00251	35	2
HG00181	36	2
HG00239	36	2



VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:52 VCFManager: START READ
2024/06/16 23:09:52 VCFManager: END READ

Processed variants : 	       4
3 0
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:52 Clusters=2

S2	0	1
S1	1	2
S3	1	2



3 4
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
100 1000
2024/06/16 23:09:52 Distances=100x100
hierarchical method=Complete
VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:52 VCFManager: START READ
2024/06/16 23:09:52 VCFManager: END READ

Processed variants : 	       4
3 0
2024/06/16 23:09:52 Distances=3x3
hierarchical method=Complete
FASTA2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:53 FastaManager: START READ
CHUNK_SIZE=16777216
2024/06/16 23:09:53 FastaManager: Chunk with 7 lines.
2024/06/16 23:09:53 FastaManager: END READ
2024/06/16 23:09:53 FastaManager: FASTA
2	S1
2	S2
3	S3
FASTA2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:53 FastaManager: START READ
2024/06/16 23:09:53 FastaManager: Chunk with 7 lines.
2024/06/16 23:09:53 FastaManager: END READ
2	S1
2	S2
2024/06/16 23:09:53 FastaManager: FASTA
3	S3
FASTA2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:53 FastaManager: START READ
2024/06/16 23:09:53 FastaManager: Chunk with 7 lines.
2024/06/16 23:09:53 FastaManager: END READ
2024/06/16 23:09:53 FastaManager: FASTA
2	S1
2	S2
3	S3
FASTA2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:53 FastaManager: START READ
2024/06/16 23:09:53 FastaManager: Chunk with 7 lines.
2024/06/16 23:09:53 FastaManager: END READ
2	S1
2	S2
2024/06/16 23:09:53 FastaManager: FASTA
3	S3
FASTA2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:53 FastaManager: START READ
2024/06/16 23:09:53 FastaManager: Chunk with 96 lines.
2024/06/16 23:09:53 FastaManager: END READ
2024/06/16 23:09:53 FastaManager: FASTA
2	contig-202000258
3	contig-73001792
4	contig-198000031
5	contig-13001800
6	contig-295001825
7	contig-366001068
8	contig-100000567
9	contig-237001826
10	contig-15000592
11	contig-168000048
12	contig-620000331
12	contig-573001861
14	contig-12001376
15	contig-30001369
16	contig-201001879
17	contig-11000629
18	contig-364
19	contig-25000365
20	contig-136001638
21	contig-127000661
22	contig-16001175
23	contig-20000917
23	contig-448001924
25	contig-171000141
25	contig-5001683
27	contig-5000427
28	contig-19001684
28	contig-7001201
30	contig-218001938
31	contig-6001939
32	contig-60001206
33	contig-65000152
34	contig-263001217
35	contig-261001227
36	contig-600000955
37	contig-16001959
38	contig-47000966
39	contig-623000970
40	contig-98000731
41	contig-52000465
42	contig-48000188
43	contig-118001491
44	contig-53001003
45	contig-230000764
46	contig-40000768
47	contig-105000229
48	contig-19001776
48	contig-186000247
2024/06/16 23:09:54 CalculateD2ChildTask(40): 	50
 ..done.
2024/06/16 23:09:54 Clusters=2

S2	0	1
S1	1	2
S3	1	2



 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:54 Clusters=2

S2	0	1
S1	1	2
S3	1	2



 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:54 Clusters=2

S2	0	1
S1	1	2
S3	1	2



VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:54 VCFManager: START READ
2024/06/16 23:09:54 VCFManager: END READ

Processed variants : 	       4
3 0
2024/06/16 23:09:54 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:54 Clusters=2

S2	0	1
S1	1	2
S3	1	2



VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:54 VCFManager: START READ
2024/06/16 23:09:54 VCFManager: END READ

Processed variants : 	       4
3 0
2024/06/16 23:09:54 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:54 Clusters=2

S2	0	1
S1	1	2
S3	1	2



VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:54 VCFManager: START READ
2024/06/16 23:09:54 VCFManager: END READ

Processed variants : 	       4
3 0
2024/06/16 23:09:54 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:55 Clusters=2

S2	0	1
S1	1	2
S3	1	2



VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:55 VCFManager: START READ
2024/06/16 23:09:55 VCFManager: END READ

Processed variants : 	       4
3 0
2024/06/16 23:09:55 Distances=3x3
hierarchical method=Complete
 ..cutHeight not given, setting it to 1.74  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:55 Clusters=2

S2	0	1
S1	1	2
S3	1	2



VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:55 VCFManager: START READ
2024/06/16 23:09:55 VCFManager: END READ

Processed variants : 	    1000
2024/06/16 23:09:55 CalculateDistancesChildTask(87): 	50
2024/06/16 23:09:55 CalculateDistancesChildTask(68): 	100
100 0
2024/06/16 23:09:55 Distances=100x100
hierarchical method=Complete
 ..cutHeight not given, setting it to 0.0794  ===>  99% of the (truncated) height range in dendro.
 ..done.
2024/06/16 23:09:55 Clusters=36

HG00126	1	5
HG00149	1	5
HG00182	1	5
HG00233	1	5
HG00262	1	5
HG00100	2	5
HG00101	2	5
HG00106	2	5
HG00107	2	5
HG00125	2	5
HG00096	3	5
HG00128	3	5
HG00154	3	5
HG00173	3	5
HG00242	3	5
HG00108	4	4
HG00129	4	4
HG00232	4	4
HG00253	4	4
HG00110	5	4
HG00121	5	4
HG00123	5	4
HG00256	5	4
HG00185	6	4
HG00189	6	4
HG00258	6	4
HG00261	6	4
HG00114	7	3
HG00133	7	3
HG00234	7	3
HG00120	8	3
HG00136	8	3
HG00236	8	3
HG00141	9	3
HG00187	9	3
HG00254	9	3
HG00142	10	3
HG00146	10	3
HG00160	10	3
HG00118	11	3
HG00138	11	3
HG00157	11	3
HG00158	12	3
HG00177	12	3
HG00178	12	3
HG00115	13	3
HG00130	13	3
HG00155	13	3
HG00111	14	3
HG00137	14	3
HG00150	14	3
HG00112	15	3
HG00132	15	3
HG00148	15	3
HG00140	16	3
HG00151	16	3
HG00237	16	3
HG00231	17	3
HG00238	17	3
HG00243	17	3
HG00180	18	3
HG00252	18	3
HG00260	18	3
HG00116	19	3
HG00122	19	3
HG00139	19	3
HG00097	20	2
HG00102	20	2
HG00145	21	2
HG00244	21	2
HG00113	22	2
HG00259	22	2
HG00099	23	2
HG00174	23	2
HG00171	24	2
HG00255	24	2
HG00176	25	2
HG00235	25	2
HG00179	26	2
HG00250	26	2
HG00103	27	2
HG00257	27	2
HG00188	28	2
HG00245	28	2
HG00127	29	2
HG00186	29	2
HG00105	30	2
HG00183	30	2
HG00119	31	2
HG00190	31	2
HG00131	32	2
HG00159	32	2
HG00109	33	2
HG00246	33	2
HG00117	34	2
HG00240	34	2
HG00143	35	2
HG00251	35	2
HG00181	36	2
HG00239	36	2



VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:55 VCFManager: START READ
2024/06/16 23:09:55 VCFManager: END READ

Processed variants : 	       4
VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:55 VCFManager: START READ
2024/06/16 23:09:55 VCFManager: END READ

Processed variants : 	       4
VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:55 VCFManager: START READ
2024/06/16 23:09:55 VCFManager: END READ

Processed variants : 	       4
VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:55 VCFManager: START READ
2024/06/16 23:09:55 VCFManager: END READ

Processed variants : 	       4
VCF2DIST : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:55 VCFManager: START READ
2024/06/16 23:09:55 VCFManager: END READ

Processed variants : 	    1000
2024/06/16 23:09:55 CalculateDistancesChildTask(81): 	50
2024/06/16 23:09:55 CalculateDistancesChildTask(59): 	100
VCF2ISTATS : Sun Jun 16 15:24:28 EDT 2024
Num of Ind = 3
VCF2ISTATS : Sun Jun 16 15:24:28 EDT 2024
Num of Ind = 3
VCF2ISTATS : Sun Jun 16 15:24:28 EDT 2024
Num of Ind = 3
VCF2TREE : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:56 VCFManager: START READ
2024/06/16 23:09:56 VCFManager: END READ

Processed variants : 	       4
2024/06/16 23:09:56 Distances=3x3
hierarchical method=Complete
VCF2TREE : Sun Jun 16 15:24:28 EDT 2024
cpus=72
using=2
2024/06/16 23:09:56 VCFManager: START READ
2024/06/16 23:09:56 VCFManager: END READ

Processed variants : 	    1000
2024/06/16 23:09:56 CalculateDistancesChildTask(91): 	50
2024/06/16 23:09:56 CalculateDistancesChildTask(70): 	100
2024/06/16 23:09:56 Distances=100x100
hierarchical method=Complete
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 100 ]
> 
> proc.time()
   user  system elapsed 
 10.737   0.566   5.289 

Example timings

fastreeR.Rcheck/fastreeR-Ex.timings

nameusersystemelapsed
dist2clusters0.8300.0390.596
dist2tree0.1720.0040.081
fasta2dist2.8350.1621.125
tree2clusters0.1950.0000.089
vcf2clusters2.2930.0360.534
vcf2dist1.0440.0470.217
vcf2istats0.4830.0610.234
vcf2tree0.6870.0040.151