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This page was generated on 2021-09-22 15:05:13 -0400 (Wed, 22 Sep 2021).

INSTALL results for diffcyt on tokay2

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raw results

Package 497/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
diffcyt 1.12.0  (landing page)
Lukas M. Weber
Snapshot Date: 2021-09-21 04:50:12 -0400 (Tue, 21 Sep 2021)
git_url: https://git.bioconductor.org/packages/diffcyt
git_branch: RELEASE_3_13
git_last_commit: 7e8f4d3
git_last_commit_date: 2021-05-19 12:34:44 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: diffcyt
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/diffcyt_1.12.0.tar.gz && rm -rf diffcyt.buildbin-libdir && mkdir diffcyt.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=diffcyt.buildbin-libdir diffcyt_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL diffcyt_1.12.0.zip && rm diffcyt_1.12.0.tar.gz diffcyt_1.12.0.zip
StartedAt: 2021-09-21 11:13:11 -0400 (Tue, 21 Sep 2021)
EndedAt: 2021-09-21 11:14:00 -0400 (Tue, 21 Sep 2021)
EllapsedTime: 49.3 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/diffcyt_1.12.0.tar.gz && rm -rf diffcyt.buildbin-libdir && mkdir diffcyt.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=diffcyt.buildbin-libdir diffcyt_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL diffcyt_1.12.0.zip && rm diffcyt_1.12.0.tar.gz diffcyt_1.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  8  183k    8 15989    0     0   134k      0  0:00:01 --:--:--  0:00:01  134k
100  183k  100  183k    0     0   803k      0 --:--:-- --:--:-- --:--:--  804k

install for i386

* installing *source* package 'diffcyt' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'diffcyt'
    finding HTML links ... done
    calcCounts                              html  
    finding level-2 HTML links ... done

    calcMedians                             html  
    calcMediansByClusterMarker              html  
    calcMediansBySampleMarker               html  
    createContrast                          html  
    createDesignMatrix                      html  
    createFormula                           html  
    diffcyt                                 html  
    generateClusters                        html  
    plotHeatmap                             html  
    prepareData                             html  
    testDA_GLMM                             html  
    testDA_edgeR                            html  
    testDA_voom                             html  
    testDS_LMM                              html  
    testDS_limma                            html  
    topClusters                             html  
    topTable                                html  
    transformData                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'diffcyt' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'diffcyt' as diffcyt_1.12.0.zip
* DONE (diffcyt)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'diffcyt' successfully unpacked and MD5 sums checked