Back to Multiple platform build/check report for BioC 3.13
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-10-13 15:05:17 -0400 (Wed, 13 Oct 2021).

INSTALL results for branchpointer on tokay2

To the developers/maintainers of the branchpointer package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/branchpointer.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 210/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
branchpointer 1.18.0  (landing page)
Beth Signal
Snapshot Date: 2021-10-12 04:50:13 -0400 (Tue, 12 Oct 2021)
git_url: https://git.bioconductor.org/packages/branchpointer
git_branch: RELEASE_3_13
git_last_commit: 0e0e947
git_last_commit_date: 2021-05-19 12:26:29 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: branchpointer
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/branchpointer_1.18.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.18.0.zip && rm branchpointer_1.18.0.tar.gz branchpointer_1.18.0.zip
StartedAt: 2021-10-12 10:55:36 -0400 (Tue, 12 Oct 2021)
EndedAt: 2021-10-12 10:57:11 -0400 (Tue, 12 Oct 2021)
EllapsedTime: 95.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/branchpointer_1.18.0.tar.gz && rm -rf branchpointer.buildbin-libdir && mkdir branchpointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=branchpointer.buildbin-libdir branchpointer_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL branchpointer_1.18.0.zip && rm branchpointer_1.18.0.tar.gz branchpointer_1.18.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 25 4716k   25 1181k    0     0  1863k      0  0:00:02 --:--:--  0:00:02 1863k
 91 4716k   91 4292k    0     0  2654k      0  0:00:01  0:00:01 --:--:-- 2654k
100 4716k  100 4716k    0     0  2728k      0  0:00:01  0:00:01 --:--:-- 2728k

install for i386

* installing *source* package 'branchpointer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'branchpointer'
    finding HTML links ... done
    exonsToIntrons                          html  
    getBranchpointSequence                  html  
    getCanonical3SS                         html  
    getExonDists                            html  
    getPPT                                  html  
    getQueryLoc                             html  
    gtfToExons                              html  
    makeBranchpointWindowForExons           html  
    makeBranchpointWindowForSNP             html  
    plotBranchpointWindow                   html  
    plotStructure                           html  
    predictBranchpoints                     html  
    predictionsToSummary                    html  
    readQueryFile                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'branchpointer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'branchpointer' as branchpointer_1.18.0.zip
* DONE (branchpointer)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'branchpointer' successfully unpacked and MD5 sums checked