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This page was generated on 2024-06-21 17:40 -0400 (Fri, 21 Jun 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4758
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4492
merida1macOS 12.7.4 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4506
kjohnson1macOS 13.6.6 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4464
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2256/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
VDJdive 1.6.0  (landing page)
Kelly Street
Snapshot Date: 2024-06-19 14:00 -0400 (Wed, 19 Jun 2024)
git_url: https://git.bioconductor.org/packages/VDJdive
git_branch: RELEASE_3_19
git_last_commit: 61940e4
git_last_commit_date: 2024-04-30 11:44:23 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    OK    NA  


BUILD BIN results for VDJdive on palomino3

To the developers/maintainers of the VDJdive package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/VDJdive.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: VDJdive
Version: 1.6.0
Command: rm -rf VDJdive.buildbin-libdir && mkdir VDJdive.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=VDJdive.buildbin-libdir VDJdive_1.6.0.tar.gz
StartedAt: 2024-06-20 19:08:23 -0400 (Thu, 20 Jun 2024)
EndedAt: 2024-06-20 19:10:00 -0400 (Thu, 20 Jun 2024)
EllapsedTime: 97.2 seconds
RetCode: 0
Status:   OK  
PackageFile: VDJdive_1.6.0.zip
PackageFileSize: 1.034 MiB

Command output

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### Running command:
###
###   rm -rf VDJdive.buildbin-libdir && mkdir VDJdive.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=VDJdive.buildbin-libdir VDJdive_1.6.0.tar.gz
###
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* installing *source* package 'VDJdive' ...
** using non-staged installation via StagedInstall field
** libs
using C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
g++ -std=gnu++17  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c TCR_EM.cpp -o TCR_EM.o
g++ -std=gnu++17 -shared -s -static-libgcc -o VDJdive.dll tmp.def RcppExports.o TCR_EM.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.19-bioc/meat/VDJdive.buildbin-libdir/VDJdive/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'VDJdive' as VDJdive_1.6.0.zip
* DONE (VDJdive)