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This page was generated on 2021-11-24 15:05:49 -0500 (Wed, 24 Nov 2021).

INSTALL results for SomaticSignatures on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SomaticSignatures.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1835/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SomaticSignatures 2.30.0  (landing page)
Julian Gehring
Snapshot Date: 2021-11-23 04:15:06 -0500 (Tue, 23 Nov 2021)
git_url: https://git.bioconductor.org/packages/SomaticSignatures
git_branch: RELEASE_3_14
git_last_commit: 03f7ad7
git_last_commit_date: 2021-10-26 12:11:42 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SomaticSignatures
Version: 2.30.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SomaticSignatures_2.30.0.tar.gz && rm -rf SomaticSignatures.buildbin-libdir && mkdir SomaticSignatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SomaticSignatures.buildbin-libdir SomaticSignatures_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SomaticSignatures_2.30.0.zip && rm SomaticSignatures_2.30.0.tar.gz SomaticSignatures_2.30.0.zip
StartedAt: 2021-11-23 09:19:31 -0500 (Tue, 23 Nov 2021)
EndedAt: 2021-11-23 09:20:48 -0500 (Tue, 23 Nov 2021)
EllapsedTime: 76.5 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SomaticSignatures_2.30.0.tar.gz && rm -rf SomaticSignatures.buildbin-libdir && mkdir SomaticSignatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SomaticSignatures.buildbin-libdir SomaticSignatures_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SomaticSignatures_2.30.0.zip && rm SomaticSignatures_2.30.0.tar.gz SomaticSignatures_2.30.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100  129k  100  129k    0     0   249k      0 --:--:-- --:--:-- --:--:--  249k
100  129k  100  129k    0     0   249k      0 --:--:-- --:--:-- --:--:--  249k

install for i386

* installing *source* package 'SomaticSignatures' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SomaticSignatures'
    finding HTML links ... done
    MutationalSignatures-class              html  
    SomaticSignatures-package               html  
    cluster-spetrum                         html  
    decomposition-functions                 html  
    gc                                      html  
    granges-utils                           html  
    finding level-2 HTML links ... done

    hs-chrs                                 html  
    kmers-data                              html  
    kmers                                   html  
    motif-functions                         html  
    mutation-context                        html  
    mutation-distribution                   html  
    mutational-normalization                html  
    mutational-plots                        html  
    mutational-signatures                   html  
    mutect                                  html  
    number-signatures                       html  
    sca-data                                html  
    signature-plot-functions                html  
    signatures21-data                       html  
    utils                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SomaticSignatures' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SomaticSignatures' as SomaticSignatures_2.30.0.zip
* DONE (SomaticSignatures)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SomaticSignatures' successfully unpacked and MD5 sums checked