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This page was generated on 2021-07-30 15:06:00 -0400 (Fri, 30 Jul 2021).

BUILD BIN results for MSnID on tokay2

To the developers/maintainers of the MSnID package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MSnID.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1204/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSnID 1.26.0  (landing page)
Vlad Petyuk
Snapshot Date: 2021-07-29 04:50:02 -0400 (Thu, 29 Jul 2021)
URL: https://git.bioconductor.org/packages/MSnID
Branch: RELEASE_3_13
Last Commit: 542b32c
Last Changed Date: 2021-05-19 12:07:42 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MSnID
Version: 1.26.0
Command: rm -rf MSnID.buildbin-libdir && mkdir MSnID.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSnID.buildbin-libdir MSnID_1.26.0.tar.gz
StartedAt: 2021-07-30 10:34:37 -0400 (Fri, 30 Jul 2021)
EndedAt: 2021-07-30 10:35:33 -0400 (Fri, 30 Jul 2021)
EllapsedTime: 56.4 seconds
RetCode: 0
Status:   OK  
PackageFile: MSnID_1.26.0.zip
PackageFileSize: 3.922 MiB

Command output

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###
### Running command:
###
###   rm -rf MSnID.buildbin-libdir && mkdir MSnID.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSnID.buildbin-libdir MSnID_1.26.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'MSnID' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MSnID'
    finding HTML links ... done
    MSnID-class                             html  
REDIRECT:topic	 class:MSnID -> MSnID-class.html [ FAIL ]
REDIRECT:topic	 $<-,MSnID-method -> MSnID-class.html [ FAIL ]
REDIRECT:topic	 [[<-,MSnID,ANY,ANY,ANY-method -> MSnID-class.html [ FAIL ]
REDIRECT:topic	 psms<-,MSnID,data.frame-method -> MSnID-class.html [ FAIL ]
    finding level-2 HTML links ... done

    MSnID-package                           html  
    MSnIDFilter-class                       html  
REDIRECT:topic	 class:MSnIDFilter -> MSnIDFilter-class.html [ FAIL ]
REDIRECT:topic	 $<-,MSnIDFilter-method -> MSnIDFilter-class.html [ FAIL ]
    accessions                              html  
    add_mod_symbol                          html  
    apply_filter                            html  
    assess_missed_cleavages                 html  
    assess_termini                          html  
    correct_peak_selection                  html  
    data                                    html  
    evaluate_filter                         html  
    fetch_conversion_table                  html  
    id_quality                              html  
    infer_parsimonious_accessions           html  
    map_mod_sites                           html  
    mass_measurement_error                  html  
    optimize_filter                         html  
    peptides                                html  
    psms                                    html  
REDIRECT:topic	 psms<- -> psms.html [ FAIL ]
    read_mzIDs                              html  
    recalibrate                             html  
    remap_accessions-method                 html  
    remap_fasta_entry_names                 html  
    report_mods                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MSnID' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSnID' as MSnID_1.26.0.zip
* DONE (MSnID)