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This page was generated on 2021-09-20 15:05:17 -0400 (Mon, 20 Sep 2021).

BUILD BIN results for MAGAR on tokay2

To the developers/maintainers of the MAGAR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MAGAR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1022/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MAGAR 1.0.1  (landing page)
Michael Scherer
Snapshot Date: 2021-09-19 04:50:10 -0400 (Sun, 19 Sep 2021)
git_url: https://git.bioconductor.org/packages/MAGAR
git_branch: RELEASE_3_13
git_last_commit: 7901096
git_last_commit_date: 2021-07-06 11:44:06 -0400 (Tue, 06 Jul 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MAGAR
Version: 1.0.1
Command: rm -rf MAGAR.buildbin-libdir && mkdir MAGAR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MAGAR.buildbin-libdir MAGAR_1.0.1.tar.gz
StartedAt: 2021-09-20 09:39:20 -0400 (Mon, 20 Sep 2021)
EndedAt: 2021-09-20 09:41:20 -0400 (Mon, 20 Sep 2021)
EllapsedTime: 119.3 seconds
RetCode: 0
Status:   OK  
PackageFile: MAGAR_1.0.1.zip
PackageFileSize: 1.302 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf MAGAR.buildbin-libdir && mkdir MAGAR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MAGAR.buildbin-libdir MAGAR_1.0.1.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'MAGAR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
** help
*** installing help indices
  converting help for package 'MAGAR'
    finding HTML links ... done
    MethQTLInput-class                      html  
    finding level-2 HTML links ... done

    MethQTLResult-class                     html  
    QTL.OPTIONS                             html  
    computeCorrelationBlocks                html  
    doImport                                html  
    doMethQTL                               html  
    doMethQTLChromosome                     html  
    filterPval                              html  
    getAnno                                 html  
    getCorrelationBlocks                    html  
    getGeno                                 html  
    getMethData                             html  
    getOverlapUniverse                      html  
    getOverlappingQTL                       html  
    getPheno                                html  
    getResult                               html  
    getResultGWASMap                        html  
    getSamples                              html  
    getSpecificQTL                          html  
    imputeMeth                              html  
    joinMethQTLResult                       html  
    loadMethQTLInput                        html  
    loadMethQTLResult                       html  
    overlapInputs                           html  
    overlapQTLs                             html  
    qtlAnnotationEnrichment                 html  
    qtlBaseSubstitutionEnrichment           html  
    qtlDistanceScatterplot                  html  
    qtlGetOption                            html  
    qtlJSON2options                         html  
    qtlManhattanPlot                        html  
    qtlOptions2JSON                         html  
    qtlPlotBaseSubstitution                 html  
    qtlPlotClusterSize                      html  
    qtlPlotSNPCpGInteraction                html  
    qtlSetOption                            html  
    qtlTFBSMotifEnrichment                  html  
    qtlUpSetPlotCorBlocks                   html  
    qtlUpSetPlotTagCpGs                     html  
    qtlUpsetPlot                            html  
    qtlVennPlot                             html  
    saveMethQTLInput                        html  
    saveMethQTLResult                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
** testing if installed package can be loaded from final location
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MAGAR' ...
** testing if installed package can be loaded
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
* MD5 sums
packaged installation of 'MAGAR' as MAGAR_1.0.1.zip
* DONE (MAGAR)