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This page was generated on 2021-09-17 15:06:06 -0400 (Fri, 17 Sep 2021).

INSTALL results for GenomeInfoDb on tokay2

To the developers/maintainers of the GenomeInfoDb package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GenomeInfoDb.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 736/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomeInfoDb 1.28.4  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2021-09-16 04:50:11 -0400 (Thu, 16 Sep 2021)
git_url: https://git.bioconductor.org/packages/GenomeInfoDb
git_branch: RELEASE_3_13
git_last_commit: 3de2a41
git_last_commit_date: 2021-09-03 15:49:43 -0400 (Fri, 03 Sep 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: GenomeInfoDb
Version: 1.28.4
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GenomeInfoDb_1.28.4.tar.gz && rm -rf GenomeInfoDb.buildbin-libdir && mkdir GenomeInfoDb.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomeInfoDb.buildbin-libdir GenomeInfoDb_1.28.4.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GenomeInfoDb_1.28.4.zip && rm GenomeInfoDb_1.28.4.tar.gz GenomeInfoDb_1.28.4.zip
StartedAt: 2021-09-16 07:35:16 -0400 (Thu, 16 Sep 2021)
EndedAt: 2021-09-16 07:36:23 -0400 (Thu, 16 Sep 2021)
EllapsedTime: 66.6 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GenomeInfoDb_1.28.4.tar.gz && rm -rf GenomeInfoDb.buildbin-libdir && mkdir GenomeInfoDb.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomeInfoDb.buildbin-libdir GenomeInfoDb_1.28.4.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GenomeInfoDb_1.28.4.zip && rm GenomeInfoDb_1.28.4.tar.gz GenomeInfoDb_1.28.4.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  9 3090k    9  290k    0     0  1030k      0  0:00:03 --:--:--  0:00:03 1028k
100 3090k  100 3090k    0     0  3888k      0 --:--:-- --:--:-- --:--:-- 3887k

install for i386

* installing *source* package 'GenomeInfoDb' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GenomeInfoDb'
    finding HTML links ... done
    GenomeDescription-class                 html  
    GenomeInfoDb-internals                  html  
    Seqinfo-class                           html  
    fetchExtendedChromInfoFromUCSC          html  
    getChromInfoFromEnsembl                 html  
    getChromInfoFromNCBI                    html  
    getChromInfoFromUCSC                    html  
    loadTaxonomyDb                          html  
    mapGenomeBuilds                         html  
    rankSeqlevels                           html  
    seqinfo                                 html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/GenomeInfoDb.buildbin-libdir/00LOCK-GenomeInfoDb/00new/GenomeInfoDb/help/seqinfo.html
    seqlevels-wrappers                      html  
    seqlevelsStyle                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GenomeInfoDb' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenomeInfoDb' as GenomeInfoDb_1.28.4.zip
* DONE (GenomeInfoDb)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'GenomeInfoDb' successfully unpacked and MD5 sums checked