Back to Multiple platform build/check report for BioC 3.13
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-09-22 15:05:14 -0400 (Wed, 22 Sep 2021).

BUILD results for FindMyFriends on tokay2

To the developers/maintainers of the FindMyFriends package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/FindMyFriends.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 634/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FindMyFriends 1.22.0  (landing page)
Thomas Lin Pedersen
Snapshot Date: 2021-09-21 04:50:12 -0400 (Tue, 21 Sep 2021)
git_url: https://git.bioconductor.org/packages/FindMyFriends
git_branch: RELEASE_3_13
git_last_commit: 526b1e4
git_last_commit_date: 2021-05-19 12:15:44 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: FindMyFriends
Version: 1.22.0
Command: chmod a+r FindMyFriends -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data FindMyFriends
StartedAt: 2021-09-21 13:58:22 -0400 (Tue, 21 Sep 2021)
EndedAt: 2021-09-21 14:02:59 -0400 (Tue, 21 Sep 2021)
EllapsedTime: 277.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r FindMyFriends -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data FindMyFriends
###
##############################################################################
##############################################################################


* checking for file 'FindMyFriends/DESCRIPTION' ... OK
* preparing 'FindMyFriends':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'FindMyFriends_intro.Rmd' using rmarkdown
Found more than one class "file" in cache; using the first, from namespace 'BiocGenerics'
Also defined by 'filehash'
Found more than one class "file" in cache; using the first, from namespace 'BiocGenerics'
Also defined by 'filehash'
Preclustering resulted in 3326 gene groups (2.11 seconds elapsed)
Grouping resulted in 3138 gene groups (6.67 seconds elapsed)
Total time elapsed was 8.78 seconds
Presplitting resulted in 3160 gene groups (0.03 seconds elapsed)
Splitting resulted in 3602 gene groups (1 minute and 42.17 seconds elapsed)
Merging resulted in 3399 gene groups (1.37 seconds elapsed)
Total time elapsed was 1 minute and 43.57 seconds
Quitting from lines 357-361 (FindMyFriends_intro.Rmd) 
Error: processing vignette 'FindMyFriends_intro.Rmd' failed with diagnostics:
info doesn't match any org info
--- failed re-building 'FindMyFriends_intro.Rmd'

SUMMARY: processing the following file failed:
  'FindMyFriends_intro.Rmd'

Error: Vignette re-building failed.
Execution halted