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This page was generated on 2021-09-22 15:05:14 -0400 (Wed, 22 Sep 2021).

INSTALL results for ExperimentSubset on tokay2

To the developers/maintainers of the ExperimentSubset package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ExperimentSubset.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 608/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ExperimentSubset 1.2.0  (landing page)
Irzam Sarfraz
Snapshot Date: 2021-09-21 04:50:12 -0400 (Tue, 21 Sep 2021)
git_url: https://git.bioconductor.org/packages/ExperimentSubset
git_branch: RELEASE_3_13
git_last_commit: f9c08bb
git_last_commit_date: 2021-05-19 12:56:45 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ExperimentSubset
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ExperimentSubset_1.2.0.tar.gz && rm -rf ExperimentSubset.buildbin-libdir && mkdir ExperimentSubset.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ExperimentSubset.buildbin-libdir ExperimentSubset_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ExperimentSubset_1.2.0.zip && rm ExperimentSubset_1.2.0.tar.gz ExperimentSubset_1.2.0.zip
StartedAt: 2021-09-21 09:54:08 -0400 (Tue, 21 Sep 2021)
EndedAt: 2021-09-21 09:56:05 -0400 (Tue, 21 Sep 2021)
EllapsedTime: 117.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ExperimentSubset_1.2.0.tar.gz && rm -rf ExperimentSubset.buildbin-libdir && mkdir ExperimentSubset.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ExperimentSubset.buildbin-libdir ExperimentSubset_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ExperimentSubset_1.2.0.zip && rm ExperimentSubset_1.2.0.tar.gz ExperimentSubset_1.2.0.zip
###
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100 56186  100 56186    0     0   352k      0 --:--:-- --:--:-- --:--:--  353k

install for i386

* installing *source* package 'ExperimentSubset' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetRangedSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSingleCellExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetTreeSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSpatialExperiment", slots in prototype and not in class: listData, elementType
** help
*** installing help indices
  converting help for package 'ExperimentSubset'
    finding HTML links ... done
    AssaySubset-class                       html  
    AssaySubset                             html  
    ExperimentSubset                        html  
    SubsetRangedSummarizedExperiment-class
                                            html  
    SubsetSingleCellExperiment-class        html  
    SubsetSpatialExperiment-class           html  
    SubsetSummarizedExperiment-class        html  
    SubsetTreeSummarizedExperiment-class    html  
    createSubset                            html  
    getSubsetAssay                          html  
    reducedDimNames-set                     html  
    reducedDimNames                         html  
    reducedDims-set-ANY-method              html  
    reducedDims-set                         html  
    setSubsetAssay                          html  
    subsetAssayCount                        html  
    subsetAssayNames                        html  
    subsetColData                           html  
    subsetColLinks                          html  
    subsetColnames                          html  
    subsetCount                             html  
    subsetDim                               html  
    subsetNames                             html  
    subsetParent                            html  
    subsetRowData                           html  
    subsetRowLinks                          html  
    subsetRownames                          html  
    subsetSpatialCoords                     html  
    subsetSpatialData                       html  
    subsetSummary                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ExperimentSubset' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ExperimentSubset' as ExperimentSubset_1.2.0.zip
* DONE (ExperimentSubset)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'ExperimentSubset' successfully unpacked and MD5 sums checked