Back to Multiple platform build/check report for BioC 3.13
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This page was generated on 2021-09-17 15:06:04 -0400 (Fri, 17 Sep 2021).

BUILD BIN results for EGAD on tokay2

To the developers/maintainers of the EGAD package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EGAD.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 559/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EGAD 1.20.0  (landing page)
Sara Ballouz
Snapshot Date: 2021-09-16 04:50:11 -0400 (Thu, 16 Sep 2021)
git_url: https://git.bioconductor.org/packages/EGAD
git_branch: RELEASE_3_13
git_last_commit: 948910f
git_last_commit_date: 2021-05-19 12:20:29 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: EGAD
Version: 1.20.0
Command: rm -rf EGAD.buildbin-libdir && mkdir EGAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EGAD.buildbin-libdir EGAD_1.20.0.tar.gz
StartedAt: 2021-09-17 09:15:40 -0400 (Fri, 17 Sep 2021)
EndedAt: 2021-09-17 09:17:06 -0400 (Fri, 17 Sep 2021)
EllapsedTime: 86.2 seconds
RetCode: 0
Status:   OK  
PackageFile: EGAD_1.20.0.zip
PackageFileSize: 36.82 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf EGAD.buildbin-libdir && mkdir EGAD.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EGAD.buildbin-libdir EGAD_1.20.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'EGAD' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EGAD'
    finding HTML links ... done
    GO.human                                html  
    GO.mouse                                html  
    GO.voc                                  html  
    assortativity                           html  
    atrr.human                              html  
    attr.mouse                              html  
    auc_multifunc                           html  
    auprc                                   html  
    auroc_analytic                          html  
    biogrid                                 html  
    build_binary_network                    html  
    build_coexp_GEOID                       html  
    build_coexp_expressionSet               html  
    build_coexp_network                     html  
    build_semantic_similarity_network       html  
    build_weighted_network                  html  
    calculate_multifunc                     html  
    conv_smoother                           html  
    example_annotations                     html  
    example_binary_network                  html  
    example_coexpression                    html  
    example_neighbor_voting                 html  
    extend_network                          html  
    filter_network                          html  
    filter_network_cols                     html  
    filter_network_rows                     html  
    filter_orthologs                        html  
    fmeasure                                html  
    genes                                   html  
    get_auc                                 html  
    get_biogrid                             html  
    get_counts                              html  
    get_density                             html  
    get_expression_data_gemma               html  
    get_expression_matrix_from_GEO          html  
    get_phenocarta                          html  
    get_prc                                 html  
    get_roc                                 html  
    make_annotations                        html  
    make_gene_network                       html  
    make_genelist                           html  
    make_transparent                        html  
    neighbor_voting                         html  
    node_degree                             html  
    ortho                                   html  
    pheno                                   html  
    plot_densities                          html  
    plot_density_compare                    html  
    plot_distribution                       html  
    plot_network_heatmap                    html  
    plot_prc                                html  
    plot_roc                                html  
    plot_roc_overlay                        html  
    plot_value_compare                      html  
    predictions                             html  
    repmat                                  html  
    run_GBA                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'EGAD' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EGAD' as EGAD_1.20.0.zip
* DONE (EGAD)