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This page was generated on 2021-09-22 15:05:13 -0400 (Wed, 22 Sep 2021).

INSTALL results for DMRcate on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DMRcate.git to
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raw results

Package 517/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DMRcate 2.6.0  (landing page)
Tim Peters
Snapshot Date: 2021-09-21 04:50:12 -0400 (Tue, 21 Sep 2021)
git_url: https://git.bioconductor.org/packages/DMRcate
git_branch: RELEASE_3_13
git_last_commit: d7de4ca
git_last_commit_date: 2021-05-19 12:03:06 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: DMRcate
Version: 2.6.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DMRcate_2.6.0.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.6.0.zip && rm DMRcate_2.6.0.tar.gz DMRcate_2.6.0.zip
StartedAt: 2021-09-21 10:46:26 -0400 (Tue, 21 Sep 2021)
EndedAt: 2021-09-21 10:47:55 -0400 (Tue, 21 Sep 2021)
EllapsedTime: 89.0 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DMRcate_2.6.0.tar.gz && rm -rf DMRcate.buildbin-libdir && mkdir DMRcate.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcate.buildbin-libdir DMRcate_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DMRcate_2.6.0.zip && rm DMRcate_2.6.0.tar.gz DMRcate_2.6.0.zip
###
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100 62447  100 62447    0     0   304k      0 --:--:-- --:--:-- --:--:--  306k

install for i386

* installing *source* package 'DMRcate' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** help
*** installing help indices
  converting help for package 'DMRcate'
    finding HTML links ... done
    CpGannotated-class                      html  
    DMR.plot                                html  
    DMRcate-internal                        html  
    DMRcate-package                         html  
    DMResults-class                         html  
    changeFDR                               html  
    cpg.annotate                            html  
    dmrcate                                 html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/DMRcate.buildbin-libdir/00LOCK-DMRcate/00new/DMRcate/help/dmrcate.html
    extractRanges                           html  
    rmSNPandCH                              html  
    sequencing.annotate                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DMRcate' ...
** testing if installed package can be loaded
Warning: replacing previous import 'minfi::getMeth' by 'bsseq::getMeth' when loading 'DMRcate'
* MD5 sums
packaged installation of 'DMRcate' as DMRcate_2.6.0.zip
* DONE (DMRcate)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'DMRcate' successfully unpacked and MD5 sums checked