Back to Multiple platform build/check report for BioC 3.13
ABC[D]EFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-09-22 15:05:13 -0400 (Wed, 22 Sep 2021).

BUILD BIN results for DMRcaller on tokay2

To the developers/maintainers of the DMRcaller package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DMRcaller.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 516/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DMRcaller 1.24.0  (landing page)
Nicolae Radu Zabet
Snapshot Date: 2021-09-21 04:50:12 -0400 (Tue, 21 Sep 2021)
git_url: https://git.bioconductor.org/packages/DMRcaller
git_branch: RELEASE_3_13
git_last_commit: 828312c
git_last_commit_date: 2021-05-19 12:12:36 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: DMRcaller
Version: 1.24.0
Command: rm -rf DMRcaller.buildbin-libdir && mkdir DMRcaller.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcaller.buildbin-libdir DMRcaller_1.24.0.tar.gz
StartedAt: 2021-09-22 08:42:36 -0400 (Wed, 22 Sep 2021)
EndedAt: 2021-09-22 08:43:51 -0400 (Wed, 22 Sep 2021)
EllapsedTime: 74.8 seconds
RetCode: 0
Status:   OK  
PackageFile: DMRcaller_1.24.0.zip
PackageFileSize: 1.893 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf DMRcaller.buildbin-libdir && mkdir DMRcaller.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMRcaller.buildbin-libdir DMRcaller_1.24.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'DMRcaller' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'DMRcaller'
    finding HTML links ... done
    DMRcaller                               html  
    finding level-2 HTML links ... done

    DMRsNoiseFilterCG                       html  
    GEs                                     html  
    analyseReadsInsideRegionsForCondition   html  
    computeDMRs                             html  
    computeDMRsReplicates                   html  
    computeMethylationDataCoverage          html  
    computeMethylationDataSpatialCorrelation
                                            html  
    computeMethylationProfile               html  
    computeOverlapProfile                   html  
    extractGC                               html  
    filterDMRs                              html  
    getWholeChromosomes                     html  
    joinReplicates                          html  
    mergeDMRsIteratively                    html  
    methylationDataList                     html  
    plotLocalMethylationProfile             html  
    plotMethylationDataCoverage             html  
    plotMethylationDataSpatialCorrelation   html  
    plotMethylationProfile                  html  
    plotMethylationProfileFromData          html  
    plotOverlapProfile                      html  
    poolMethylationDatasets                 html  
    poolTwoMethylationDatasets              html  
    readBismark                             html  
    readBismarkPool                         html  
    saveBismark                             html  
    syntheticDataReplicates                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DMRcaller' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DMRcaller' as DMRcaller_1.24.0.zip
* DONE (DMRcaller)